RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 GPR78Q96P69 363 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 STARD7Q9NQZ5 370 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 RRN3Q9NYV6 651 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 NEU3Q9UQ49 428 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 TRAF6Q9Y4K3 522 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 ZFP37Q9Y6Q3 630 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 MAGEA13PA6NCF6 341 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 F8W8V4 182 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 SRP72O76094 671 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 CKMT2P17540 419 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 ACLYP53396 1101 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 MSLNQ13421 630 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 NAB1Q13506 487 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 LBRQ14739 615 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 TBCCQ15814 346 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 TIGD7Q6NT04 549 aaPredicted RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 PAQR3Q6TCH7 311 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 SATL1Q86VE3 508 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 RAET1EQ8TD07 263 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 KLHL32Q96NJ5 620 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 HAPLN3Q96S86 360 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 PRPF18Q99633 342 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 CIB1Q99828 191 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 MRPL57Q9BQC6 102 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 ZBED2Q9BTP6 218 aa13.38□□□□□ -0.27
MCF2L-213ENST00000421756 AFF4Q9UHB7 1163 aaKnown RBP13.38□□□□□ -0.27
MCF2L-213ENST00000421756 APLP1P51693 650 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SLC7A2P52569 658 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 PSME3P61289 254 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 C18orf21Q32NC0 220 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 MTX3Q5HYI7 312 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 FBXL19Q6PCT2 694 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 PGAP3Q96FM1 320 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SERPINI1Q99574 410 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SLC25A51Q9H1U9 297 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 IGSF5Q9NSI5 407 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 CDC7O00311 574 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 CD3EAPO15446 510 aaKnown RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 FGF10O15520 208 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 FKBP6O75344 327 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 TIPRLO75663 272 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SGSHP51688 502 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 CCNG1P51959 295 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 CDK18Q07002 472 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 GRB7Q14451 532 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 BRMS1LQ5PSV4 323 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 CILP2Q8IUL8 1156 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 MYO1HQ8N1T3 1032 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SKA2Q8WVK7 121 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 LRTOMTQ8WZ04 291 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 PHF12Q96QT6 1004 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 RTKNQ9BST9 563 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 A6NHS1 94 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 BTN3A1O00481 513 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 AKAP10O43572 662 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 NIPSNAP2O75323 286 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 IL1BP01584 269 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 ALDH2P05091 517 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 ME2P23368 584 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 CRABP2P29373 138 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 MTTPP55157 894 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 HTRA3P83110 453 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 PTPRNQ16849 979 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 ATXN7L2Q5T6C5 722 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SLC24A5Q71RS6 500 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 ATP6V0D2Q8N8Y2 350 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 CD99L2Q8TCZ2 262 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 LINC01599Q8WXQ3 324 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 GRIP2Q9C0E4 1043 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 ATP13A1Q9HD20 1204 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 EVLQ9UI08 416 aaPredicted RBP13.37□□□□□ -0.27
MCF2L-213ENST00000421756 SPO11Q9Y5K1 396 aa13.37□□□□□ -0.27
MCF2L-213ENST00000421756 hCG_2014768A0A024R1R8 64 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 TMEM114B3SHH9 223 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 F5H5T6 163 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 ADAMTS4O75173 837 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 NDUFS3O75489 264 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 GRIA3P42263 894 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 AIF1P55008 147 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 PDK3Q15120 406 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 C16orf89Q6UX73 402 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 LILRA2Q8N149 483 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 PQLC1Q8N2U9 271 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 C2CD4AQ8NCU7 369 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 CCDC97Q96F63 343 aaPredicted RBP13.36□□□□□ -0.27
MCF2L-213ENST00000421756 DCUN1D1Q96GG9 259 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 CIDEBQ9UHD4 219 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 NPEPPSL1A6NEC2 478 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 MRASO14807 208 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 NCK1P16333 377 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 DIO3P55073 304 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 FKBP1BP68106 108 aa13.36□□□□□ -0.27
MCF2L-213ENST00000421756 SH3BP2P78314 561 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms