RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CHRNB2P17787 502 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 GJB2P29033 226 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 GGT5P36269 586 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 AVPR1AP37288 418 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 LIFRP42702 1097 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 PAFAH1B1P43034 410 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 GPR12P47775 334 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 POLD2P49005 469 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 RASSF2P50749 326 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 BLKP51451 505 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TPM4P67936 248 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TUBB4BP68371 445 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 PPATQ06203 517 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 POU5F1BQ06416 359 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TBX2Q13207 712 aaPredicted RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 GPS2Q13227 327 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 IDI1Q13907 227 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 CAMK1Q14012 370 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 KRT32Q14532 448 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 STX1AQ16623 288 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 ZNF766Q5HY98 468 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 EPHA10Q5JZY3 1008 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 WASHC2DQ5SRD0 308 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 SLC9C2Q5TAH2 1124 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 JAKMIP3Q5VZ66 844 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 NCAPH2Q6IBW4 605 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 HEPHL1Q6MZM0 1159 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TMEM71Q6P5X7 295 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 CTR9Q6PD62 1173 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 C17orf99Q6UX52 265 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 SLC16A12Q6ZSM3 486 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 RUFY3Q7L099 469 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 CCDC186Q7Z3E2 898 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 ZMIZ2Q8NF64 920 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 OR4N2Q8NGD1 307 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 GABPB2Q8TAK5 448 aaPredicted RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 CEP76Q8TAP6 659 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 ZCCHC10Q8TBK6 192 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 GDPD5Q8WTR4 605 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 INPP5DQ92835 1189 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 ZBTB10Q96DT7 871 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 KIF1BPQ96EK5 621 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 RNF125Q96EQ8 232 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 APOPT1Q96IL0 206 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 VCPIP1Q96JH7 1222 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 PPM1MQ96MI6 270 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 ZNF830Q96NB3 372 aaPredicted RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 THUMPD2Q9BTF0 503 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 UPF3BQ9BZI7 483 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 LSG1Q9H089 658 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 NAT10Q9H0A0 1025 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 FAM234AQ9H0X4 552 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 ISCUQ9H1K1 167 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TTYH1Q9H313 450 aaPredicted RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 ZSCAN16Q9H4T2 348 aaPredicted RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 KLHL31Q9H511 634 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 WDR6Q9NNW5 1121 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 KRCC1Q9NPI7 259 aaPredicted RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 PDRG1Q9NUG6 133 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 HYPKQ9NX55 129 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 PPP1R14DQ9NXH3 145 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 IL1RAPL1Q9NZN1 696 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 CWC15Q9P013 229 aaKnown RBP2.79□□□□□ -1.96
VPS41-206ENST00000418457 HCN3Q9P1Z3 774 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 PEMTQ9UBM1 199 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 CLIP2Q9UDT6 1046 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 TSPYL4Q9UJ04 414 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 CFAP45Q9UL16 551 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 SQORQ9Y6N5 450 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 NRXN3Q9Y4C0 1643 aa2.79□□□□□ -1.96
VPS41-206ENST00000418457 MED1Q15648 1581 aaPredicted RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 SLIT1O75093 1534 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PTPRUQ92729 1446 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SBNO1A3KN83 1393 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 FLT4P35916 1363 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PHLPP2Q6ZVD8 1323 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 VPS37CA5D8V6 355 aaPredicted RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 PABPN1LA6NDY0 278 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 GOLGA6L9A6NEM1 432 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 MYMKA6NI61 221 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 BECN2A8MW95 431 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 TULP2O00295 520 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SLC25A17O43808 307 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 CLDN7O95471 211 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 BMP15O95972 392 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 URODP06132 367 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 ENO3P13929 434 aaPredicted RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 CTPS1P17812 591 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 CASTP20810 708 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 SCP2P22307 547 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PAX3P23760 479 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PPP3CCP48454 512 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 ENTPD1P49961 510 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 CDH12P55289 794 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 YWHAZP63104 245 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 EFNB1P98172 346 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SLC18A2Q05940 514 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 G3BP1Q13283 466 aaKnown RBP eCLIP2.78□□□□□ -1.96
VPS41-206ENST00000418457 EIF4A2Q14240 407 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 ODF3L2Q3SX64 289 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms