RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RETREG3Q86VR2 466 aa11.93□□□□□ -0.5
LIMK1-202ENST00000418310 AFAP1L2Q8N4X5 818 aa11.93□□□□□ -0.5
LIMK1-202ENST00000418310 ATAD1Q8NBU5 361 aa11.93□□□□□ -0.5
LIMK1-202ENST00000418310 ADCY4Q8NFM4 1077 aa11.93□□□□□ -0.5
LIMK1-202ENST00000418310 DNAJB14Q8TBM8 379 aa11.93□□□□□ -0.5
LIMK1-202ENST00000418310 NOL6Q9H6R4 1146 aaKnown RBP11.93□□□□□ -0.5
LIMK1-202ENST00000418310 SARS2Q9NP81 518 aaKnown RBP11.93□□□□□ -0.5
LIMK1-202ENST00000418310 SPAG4Q9NPE6 437 aa11.93□□□□□ -0.5
LIMK1-202ENST00000418310 CNOT6Q9ULM6 557 aaKnown RBP11.93□□□□□ -0.5
LIMK1-202ENST00000418310 A0A087X1B8 175 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 GOLGA8CPA6NN73 597 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 H3BMM5 538 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 PIP5K1BO14986 540 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 BAIAP3O94812 1187 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 MTHFD1P11586 935 aaKnown RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 ATP6V1B2P21281 511 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 USP46P62068 366 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SH3BP2P78314 561 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 DYNC1I2Q13409 638 aaKnown RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 KIAA0930Q6ICG6 404 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 RTL3Q8N8U3 475 aaKnown RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 NUDT8Q8WV74 236 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 VPS33AQ96AX1 596 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 ASB9Q96DX5 294 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 C19orf60Q96EN9 201 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 RPRD1AQ96P16 312 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SEMA3CQ99985 751 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 AKTIPQ9H8T0 292 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 ABCC13Q9NSE7 274 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SLC27A5Q9Y2P5 690 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 TRPV2Q9Y5S1 764 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 PSMD3O43242 534 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 NPHS1O60500 1241 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 B4GALT3O60512 393 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 GNAO1P09471 354 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 RPS6KA3P51812 740 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 KPNA2P52292 529 aaKnown RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 PRKAA2P54646 552 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SIRPB2Q5JXA9 342 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 FAM47BQ8NA70 645 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 C1orf50Q9BV19 199 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 UNC93B1Q9H1C4 597 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 GSTO2Q9H4Y5 243 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 EML4Q9HC35 981 aaKnown RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 GMIPQ9P107 970 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 RNF11Q9Y3C5 154 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 MYLKQ15746 1914 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 A0A0J9YYE9 177 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SUPT3HB4E1H0 165 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 FOXD2O60548 495 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SUPT3HO75486 399 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 STAMBPO95630 424 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 COL6A2P12110 1019 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 INHBCP55103 352 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 PFKPQ01813 784 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 YWHAHQ04917 246 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 LRP8Q14114 963 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SQLEQ14534 574 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
LIMK1-202ENST00000418310 CILP2Q8IUL8 1156 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 IGSF8Q969P0 613 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SLCO4A1Q96BD0 722 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 SPON2Q9BUD6 331 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 RAB26Q9ULW5 256 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 USP22Q9UPT9 525 aa11.92□□□□□ -0.5
LIMK1-202ENST00000418310 PDCD11Q14690 1871 aaKnown RBP11.91□□□□□ -0.5
LIMK1-202ENST00000418310 ARHGAP10A1A4S6 786 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 HAS3O00219 553 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 SOCS2O14508 198 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 DENRO43583 198 aaKnown RBP11.91□□□□□ -0.5
LIMK1-202ENST00000418310 GOT2P00505 430 aaKnown RBP11.91□□□□□ -0.5
LIMK1-202ENST00000418310 OR1G1P47890 313 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 IKBKEQ14164 716 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 SEMA3AQ14563 771 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 TBCELQ5QJ74 424 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 SMYD5Q6GMV2 418 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 HMBOX1Q6NT76 420 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 CYHR1Q6ZMK1 362 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 ARHGAP22Q7Z5H3 698 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 DHFR2Q86XF0 187 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 CNTN4Q8IWV2 1026 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 OFCC1Q8IZS5 231 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 PELI3Q8N2H9 469 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 RSPH1Q8WYR4 309 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 MYEOVQ96EZ4 313 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 DCUN1D5Q9BTE7 237 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 NOD1Q9Y239 953 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 RNF103-CHMP3A0A140T963 221 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 SMIM31A0A1B0GVY4 71 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 GPR39O43194 453 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 ZNF26P17031 533 aaPredicted RBP11.91□□□□□ -0.5
LIMK1-202ENST00000418310 FMO4P31512 558 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 CSRP3P50461 194 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 DIO3P55073 304 aa11.91□□□□□ -0.5
LIMK1-202ENST00000418310 PCBP1Q15365 356 aaKnown RBP eCLIP11.91□□□□□ -0.5
LIMK1-202ENST00000418310 KDELC1Q6UW63 502 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms