RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 MAGEA3P43357 314 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 CDKN1CP49918 316 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 NDST2P52849 883 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 SLC5A3P53794 718 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 SULT2A1Q06520 285 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 HECTD2Q5U5R9 776 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 OVOS1Q6IE37 1185 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 HMCESQ96FZ2 354 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 CD274Q9NZQ7 290 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 VWA7Q9Y334 891 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 RBMX2Q9Y388 322 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 BOLA2-SMG1P6H3BVE0 249 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 BTN3A1O00481 513 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 HSPA8P11142 646 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 ACVRL1P37023 503 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 DGCR6Q14129 220 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 C18orf21Q32NC0 220 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 ALFQ53S48 1182 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 PERM1Q5SV97 790 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 PGM2L1Q6PCE3 622 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 KDM1BQ8NB78 822 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 RTP4Q96DX8 246 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 THUMPD3Q9BV44 507 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 AKTIPQ9H8T0 292 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 WDR6Q9NNW5 1121 aaKnown RBP13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 MID2Q9UJV3 735 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 RNF112Q9ULX5 631 aa13.24□□□□□ -0.29
TNFRSF8-203ENST00000417814 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 TRIM38O00635 465 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 SBK3P0C264 359 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 ATP5F1P24539 256 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 DGKQP52824 942 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 CDKN2DP55273 166 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 TMEM135Q86UB9 458 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZDHHC17Q8IUH5 632 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 PGAM4Q8N0Y7 254 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 ZBTB26Q9HCK0 441 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 PRDM8Q9NQV8 689 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 PRDM5Q9NQX1 630 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 PCDHGC4Q9Y5F7 938 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 COMMD3-BMI1R4GMX3 469 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 C5orf42Q9H799 3197 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 A0A0C4DFX4 3053 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 ATAD5Q96QE3 1844 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 A0A1W2PPW3 197 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 CBX4O00257 560 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 EI24O14681 340 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 NOBOXO60393 691 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 IPO13O94829 963 aaKnown RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 MLNP12872 115 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 CYP4B1P13584 511 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 IL10P22301 178 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 MAP4P27816 1152 aaKnown RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 OR1E1P30953 314 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 NPY2RP49146 381 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 GLUD2P49448 558 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 CASP9P55211 416 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 MTPNP58546 118 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 BNIP3Q12983 259 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 BFSP2Q13515 415 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 TRIM25Q14258 630 aaKnown RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 TAF12Q16514 161 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 UGP2Q16851 508 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 RAB44Q7Z6P3 723 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 GPC2Q8N158 579 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 TTC39CQ8N584 583 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 LRRC52Q8N7C0 313 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 HNRNPABQ99729 332 aaKnown RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 EGFL8Q99944 293 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 YIPF2Q9BWQ6 316 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 HPS4Q9NQG7 708 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 RRN3Q9NYV6 651 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 PAIP2BQ9ULR5 123 aaKnown RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 MYRFQ9Y2G1 1151 aa13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 AAR2Q9Y312 384 aaKnown RBP13.23□□□□□ -0.29
TNFRSF8-203ENST00000417814 TRPC5OSA6NMA1 111 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 E5RI56 91 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 FAM163BP0C2L3 166 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 PRKACGP22612 351 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 TSNQ15631 228 aaKnown RBP13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 ARMC12Q5T9G4 340 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 TIFABQ6ZNK6 161 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 GPR141Q7Z602 305 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 CRYBG2Q8N1P7 616 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 FNDC5Q8NAU1 212 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 ADAM2Q99965 735 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 C1orf21Q9H246 121 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 NMUR1Q9HB89 426 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 SPAG4Q9NPE6 437 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 ADARB2Q9NS39 739 aaKnown RBP13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 CNOT6Q9ULM6 557 aaKnown RBP13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 FOCADQ5VW36 1801 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 NRCAMQ92823 1304 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 C17orf102A2RUQ5 167 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 VILLO15195 856 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 GSTA4O15217 222 aa13.22□□□□□ -0.29
TNFRSF8-203ENST00000417814 ALDH1A2O94788 518 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms