RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 LIMK2P53671 638 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 SNX16P57768 344 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 KIAA1024LP59773 190 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 MYL5Q02045 173 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 KLRB1Q12918 225 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 UGP2Q16851 508 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 DEFB109BQ30KR1 87 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 FAM102AQ5T9C2 384 aaPredicted RBP13.81□□□□□ -0.2
SSB-204ENST00000417292 ATP1A1-AS1Q5TC04 95 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 FAM72AQ5TYM5 149 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 NKAIN2Q5VXU1 208 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 FAM72DQ6L9T8 149 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 FAM72BQ86X60 149 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 UNC5BQ8IZJ1 945 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 AGBL5Q8NDL9 886 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 APOBEC4Q8WW27 367 aaKnown RBP13.81□□□□□ -0.2
SSB-204ENST00000417292 CFAP57Q96MR6 1250 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 LGR4Q9BXB1 951 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 SPRY4Q9C004 299 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 MAGEH1Q9H213 219 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 GPN2Q9H9Y4 310 aaPredicted RBP13.81□□□□□ -0.2
SSB-204ENST00000417292 CYP4F12Q9HCS2 524 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 SLC39A1Q9NY26 324 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 TMEM9Q9P0T7 183 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 OR12D3Q9UGF7 316 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 HPCAL4Q9UM19 191 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 TP53TG5Q9Y2B4 290 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 CACNA1DQ01668 2161 aa13.81□□□□□ -0.2
SSB-204ENST00000417292 RHPN2P1A8MT19 583 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 CACNB4O00305 520 aaPredicted RBP13.8□□□□□ -0.2
SSB-204ENST00000417292 BUB1O43683 1085 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 IGSF6O95976 241 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 PRKCGP05129 697 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 FGF1P05230 155 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 RNF224P0DH78 156 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 RHOQP17081 205 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 XPAP23025 273 aaPredicted RBP13.8□□□□□ -0.2
SSB-204ENST00000417292 CSF2RBP32927 897 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 KRT9P35527 623 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 MMP12P39900 470 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 GABRB2P47870 512 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 SUOXP51687 545 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 PTK2Q05397 1052 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 RAD51Q06609 339 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 TRA2AQ13595 282 aaKnown RBP eCLIP13.8□□□□□ -0.2
SSB-204ENST00000417292 RAPGEF1Q13905 1077 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 CLPPQ16740 277 aaPredicted RBP13.8□□□□□ -0.2
SSB-204ENST00000417292 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 ANKS6Q68DC2 871 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 RWDD4Q6NW29 188 aaKnown RBP13.8□□□□□ -0.2
SSB-204ENST00000417292 SLC47A2Q86VL8 602 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 ZSWIM9Q86XI8 627 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 XYLT1Q86Y38 959 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 NRROSQ86YC3 692 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 BMPERQ8N8U9 685 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 OR4D9Q8NGE8 314 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 KIAA1524Q8TCG1 905 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 PATE1Q8WXA2 126 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 EXOC2Q96KP1 924 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 ASPSCR1Q9BZE9 553 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 KLC2Q9H0B6 622 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 HSD3B7Q9H2F3 369 aa13.8□□□□□ -0.2
SSB-204ENST00000417292 RP1L1Q8IWN7 2480 aaPredicted RBP13.8□□□□□ -0.2
SSB-204ENST00000417292 ABCA12Q86UK0 2595 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 TSPAN11A1L157 253 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 SYCE3A1L190 88 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 B4E171 279 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 TNFRSF10CO14798 259 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 RAMP2O60895 175 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 AGFG2O95081 481 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 ECEL1O95672 775 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 THRAP10827 490 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 ATP1A3P13637 1013 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 CDK11BP21127 795 aaKnown RBP13.79□□□□□ -0.2
SSB-204ENST00000417292 CSTF2P33240 577 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSB-204ENST00000417292 CLCN1P35523 988 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 SCNN1AP37088 669 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 TSPAN7P41732 249 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
SSB-204ENST00000417292 RHOAP61586 193 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 NRG1Q02297 640 aaPredicted RBP13.79□□□□□ -0.2
SSB-204ENST00000417292 DCAF12Q5T6F0 453 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 KLHDC7AQ5VTJ3 777 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 TIPARPQ7Z3E1 657 aaKnown RBP13.79□□□□□ -0.2
SSB-204ENST00000417292 PELI3Q8N2H9 469 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 CCDC112Q8NEF3 446 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 NOL6Q9H6R4 1146 aaKnown RBP13.79□□□□□ -0.2
SSB-204ENST00000417292 IGSF5Q9NSI5 407 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 LHX3Q9UBR4 397 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 TMEM59LQ9UK28 342 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 ST14Q9Y5Y6 855 aa13.79□□□□□ -0.2
SSB-204ENST00000417292 FBN2P35556 2912 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 PRSS38A1L453 326 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 ZSCAN5CA6NGD5 496 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 EFCAB7A8K855 629 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 EPHB6O15197 1021 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms