RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 CCNJLQ8IV13 435 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 NDUFAF2Q8N183 169 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 DNAAF3Q8N9W5 541 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 FLCNQ8NFG4 579 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 DTX3LQ8TDB6 740 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 HNRNPLLQ8WVV9 542 aaKnown RBP13.32□□□□□ -0.28
CNN3-203ENST00000415017 NAT9Q9BTE0 207 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 KDM4CQ9H3R0 1056 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 MFSD1Q9H3U5 465 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 TREX1Q9NSU2 369 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 PIH1D1Q9NWS0 290 aaKnown RBP13.32□□□□□ -0.28
CNN3-203ENST00000415017 SYBUQ9NX95 663 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 IL17CQ9P0M4 197 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 NFKBIL1Q9UBC1 381 aaPredicted RBP13.32□□□□□ -0.28
CNN3-203ENST00000415017 B4GALT6Q9UBX8 382 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 ZNF711Q9Y462 761 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 TCAF1Q9Y4C2 921 aa13.32□□□□□ -0.28
CNN3-203ENST00000415017 ZNF318Q5VUA4 2279 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 FANCMQ8IYD8 2048 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 HEATR9A2RTY3 570 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 PSMD11O00231 422 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 PLK4O00444 970 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 AURKAO14965 403 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 APBB3O95704 486 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 C1QAP02745 245 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 PRKCGP05129 697 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 TSHRP16473 764 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 CTPS1P17812 591 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 VIPR1P32241 457 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 ELK3P41970 407 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 CXCL12P48061 93 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 TPMTP51580 245 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 CCR3P51677 355 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 ZNF140P52738 457 aaPredicted RBP13.31□□□□□ -0.28
CNN3-203ENST00000415017 SESN2P58004 480 aaPredicted RBP13.31□□□□□ -0.28
CNN3-203ENST00000415017 CCDC15Q0P6D6 951 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 ELP6Q0PNE2 266 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
CNN3-203ENST00000415017 PDIA2Q13087 525 aaKnown RBP13.31□□□□□ -0.28
CNN3-203ENST00000415017 LAMB3Q13751 1172 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
CNN3-203ENST00000415017 CCDC38Q502W7 563 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 NEK5Q6P3R8 708 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 EMBQ6PCB8 327 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 LIPIQ6XZB0 460 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 USP45Q70EL2 814 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 NLRP9Q7RTR0 991 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 MAML2Q8IZL2 1156 aaPredicted RBP13.31□□□□□ -0.28
CNN3-203ENST00000415017 HDDC3Q8N4P3 179 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 TMEM105Q8N8V8 129 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 TSTD1Q8NFU3 115 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 NELL1Q92832 810 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 CAVIN3Q969G5 261 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 ZNF778Q96MU6 729 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 FBXL12Q9NXK8 326 aa13.31□□□□□ -0.28
CNN3-203ENST00000415017 ZCWPW2A0A1B0GU75 182 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 A0A1W2PP55 124 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 CCDC151A5D8V7 595 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 H7C0S8 307 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 STK25O00506 426 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 TSPAN6O43657 245 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 BANF1O75531 89 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 ALDH1A2O94788 518 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 CRTAMO95727 393 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 PIRTP0C851 137 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 CYP2A6P11509 494 aaPredicted RBP13.3□□□□□ -0.28
CNN3-203ENST00000415017 NFKBIAP25963 317 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 MAGEA4P43358 317 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 TNNT3P45378 269 aaPredicted RBP13.3□□□□□ -0.28
CNN3-203ENST00000415017 STC1P52823 247 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 EPHB1P54762 984 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 CRADDP78560 199 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 PDE1BQ01064 536 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 POU6F1Q14863 301 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 SLMAPQ14BN4 828 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 BRD3Q15059 726 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 CNGA3Q16281 694 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 POM121L1PQ3SYA9 428 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 BBS9Q3SYG4 887 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 TTC31Q49AM3 519 aaPredicted RBP13.3□□□□□ -0.28
CNN3-203ENST00000415017 TMEM259Q4ZIN3 620 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 TSTD2Q5T7W7 516 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 FBXL19Q6PCT2 694 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 LYSMD3Q7Z3D4 306 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 TECPR1Q7Z6L1 1165 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 TSPAN33Q86UF1 283 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 NLRP8Q86W28 1048 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 GSPT2Q8IYD1 628 aaKnown RBP13.3□□□□□ -0.28
CNN3-203ENST00000415017 FBXL6Q8N531 539 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 MREGQ8N565 214 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 OR13J1Q8NGT2 312 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 ERLEC1Q96DZ1 483 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 SGSM3Q96HU1 749 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 COQ10AQ96MF6 247 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 EPB41L4BQ9H329 900 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 EPHX3Q9H6B9 360 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 ZFYVE1Q9HBF4 777 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 C11orf16Q9NQ32 467 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms