RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TRIP6Q15654 476 aaKnown RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 DENND2CQ68D51 928 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 DARS2Q6PI48 645 aaKnown RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 DBX2Q6ZNG2 339 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 PIP4P1Q86T03 277 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 PARGQ86W56 976 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 SPATS2Q86XZ4 545 aaKnown RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 RAVER1Q8IY67 606 aaKnown RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 CNTD1Q8N815 330 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 TP53I13Q8NBR0 393 aaPredicted RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 LPCAT1Q8NF37 534 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 ACTL9Q8TC94 416 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 CCHCR1Q8TD31 782 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 PIH1D2Q8WWB5 315 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 ALG3Q92685 438 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 IMP4Q96G21 291 aaKnown RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 PPP1R2P1Q96PQ5 205 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 QKIQ96PU8 341 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHD1-202ENST00000414220 MLPHQ9BV36 600 aaPredicted RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 CEP41Q9BYV8 373 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 DNAJC28Q9NX36 388 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 PACSIN2Q9UNF0 486 aaPredicted RBP14.75□□□□□ -0.05
CHD1-202ENST00000414220 PPP2R2CQ9Y2T4 447 aa14.75□□□□□ -0.05
CHD1-202ENST00000414220 PCDH15Q96QU1 1955 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 CFAP54Q96N23 3096 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 SPTY2D1-AS1A0A0U1RR47 76 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 ANKRD66B4E2M5 251 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 CACNB4O00305 520 aaPredicted RBP14.74□□□□□ -0.05
CHD1-202ENST00000414220 DDX3YO15523 660 aaKnown RBP14.74□□□□□ -0.05
CHD1-202ENST00000414220 HEXIM1O94992 359 aaKnown RBP14.74□□□□□ -0.05
CHD1-202ENST00000414220 PYGLP06737 847 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 PDHA1P08559 390 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 RBP3P10745 1247 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 MSNP26038 577 aaKnown RBP14.74□□□□□ -0.05
CHD1-202ENST00000414220 EPHA8P29322 1005 aaPredicted RBP14.74□□□□□ -0.05
CHD1-202ENST00000414220 HNF1BP35680 557 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 PFN3P60673 137 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 SKOR1P84550 965 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 IL9RQ01113 521 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 CDK18Q07002 472 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 ADCY2Q08462 1091 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 RALGDSQ12967 914 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 ZNF211Q13398 564 aaPredicted RBP14.74□□□□□ -0.05
CHD1-202ENST00000414220 IRF4Q15306 451 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 WSCD2Q2TBF2 565 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 SAP25Q8TEE9 199 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 NUS1Q96E22 293 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 MCCC1Q96RQ3 725 aaPredicted RBP14.74□□□□□ -0.05
CHD1-202ENST00000414220 RBM15Q96T37 977 aaKnown RBP eCLIP14.74□□□□□ -0.05
CHD1-202ENST00000414220 EVA1BQ9NVM1 165 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 FAM153AQ9UHL3 310 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 TRPM6Q9BX84 2022 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 CACNA1EQ15878 2313 aa14.74□□□□□ -0.05
CHD1-202ENST00000414220 A0A0U1RQJ8 604 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 GOLGA6CA6NDK9 693 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 TRIM16O95361 564 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 PCCBP05166 539 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 GOLGA6DP0CG33 693 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 IGFALSP35858 605 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 SIM1P81133 766 aaPredicted RBP14.73□□□□□ -0.05
CHD1-202ENST00000414220 INPP5AQ14642 412 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 CNGA3Q16281 694 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 PCSK7Q16549 785 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 MAIP1Q8WWC4 291 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 NSMCE3Q96MG7 304 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 APOOQ9BUR5 198 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 FRMD8P1Q9BZ68 369 aaPredicted RBP14.73□□□□□ -0.05
CHD1-202ENST00000414220 SLC13A1Q9BZW2 595 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 MBNL1Q9NR56 388 aaKnown RBP14.73□□□□□ -0.05
CHD1-202ENST00000414220 RAD18Q9NS91 495 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 GOLGA6AQ9NYA3 693 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 PKD2L2Q9NZM6 624 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 FTSJ1Q9UET6 329 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 RSPH14Q9UHP6 348 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 PCOLCE2Q9UKZ9 415 aa14.73□□□□□ -0.05
CHD1-202ENST00000414220 APOBEC2Q9Y235 224 aaKnown RBP14.73□□□□□ -0.05
CHD1-202ENST00000414220 WDR87Q6ZQQ6 2873 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 PLXNA2O75051 1894 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 RGSL1A5PLK6 1076 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 CAPN8A6NHC0 703 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 NPIPB15A6NHN6 443 aaPredicted RBP14.72□□□□□ -0.05
CHD1-202ENST00000414220 KCNN4O15554 427 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 ANXA9O76027 345 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 LDOC1O95751 146 aaPredicted RBP14.72□□□□□ -0.05
CHD1-202ENST00000414220 CSF2P04141 144 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 MMP2P08253 660 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 HOXC4P09017 264 aaPredicted RBP14.72□□□□□ -0.05
CHD1-202ENST00000414220 ALPIP09923 528 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 TSHRP16473 764 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 JUNDP17535 347 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 NFKB1P19838 968 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 RBL1P28749 1068 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 PPARDQ03181 441 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 WASHC5Q12768 1159 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 BNIP3Q12983 259 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 MPP3Q13368 585 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 NFATC4Q14934 902 aa14.72□□□□□ -0.05
CHD1-202ENST00000414220 FAXCQ5TGI0 409 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms