RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 XIAPP98170 497 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 ITGA7Q13683 1181 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 HNRNPDQ14103 355 aaKnown RBP9.46□□□□□ -0.9
SNHG3-201ENST00000413987 MESDQ14696 234 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 NFIL3Q16649 462 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 SMU1Q2TAY7 513 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.9
SNHG3-201ENST00000413987 CYP4A22Q5TCH4 519 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 FAM91A1Q658Y4 838 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 SLC25A24Q6NUK1 477 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 NEK5Q6P3R8 708 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 IZUMO2Q6UXV1 221 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 TAGAPQ8N103 731 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 GPD1LQ8N335 351 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 OR10H5Q8NGA6 315 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 CCDC110Q8TBZ0 833 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 DTX3LQ8TDB6 740 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 LGR4Q9BXB1 951 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 XKR8Q9H6D3 395 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 GPAMQ9HCL2 828 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 LATS2Q9NRM7 1088 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 ZDHHC7Q9NXF8 308 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 NDE1Q9NXR1 346 aa9.46□□□□□ -0.9
SNHG3-201ENST00000413987 KIAA0100Q14667 2235 aaKnown RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 SMIM35A0A1B0GVV1 85 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 EXOC1LA0A1B0GW35 172 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 A0A1W2PP55 124 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 BLACEA4D250 179 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 TRIM43BA6NCK2 446 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 FOXO6A8MYZ6 492 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 APOL1O14791 398 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 PGRMC2O15173 223 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 FKBP6O75344 327 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 SPAG7O75391 227 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 FTLP02792 175 aaPredicted RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 ANPEPP15144 967 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 HPGDP15428 266 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 KRT15P19012 456 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 CCNA2P20248 432 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 CA4P22748 312 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 PGM1P36871 562 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 MARCKSL1P49006 195 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 FMO5P49326 533 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 SULT2A1Q06520 285 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 CYP24A1Q07973 514 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 THOC5Q13769 683 aaKnown RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 DENND5AQ6IQ26 1287 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 PTCHD4Q6ZW05 846 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 GPR149Q86SP6 731 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 ADGRG6Q86SQ4 1221 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 TMEM200AQ86VY9 491 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 WDR49Q8IV35 697 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 HDDC3Q8N4P3 179 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 MUL1Q969V5 352 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 TRIM43Q96BQ3 446 aaPredicted RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 ZNF653Q96CK0 615 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 HAUS1Q96CS2 278 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 DGCR14Q96DF8 476 aaKnown RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 FAM120BQ96EK7 910 aaKnown RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 ADAD1Q96M93 576 aaKnown RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 ITPAQ9BY32 194 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 EIF2AQ9BY44 585 aaKnown RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 PDZD7Q9H5P4 517 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 NRIP3Q9NQ35 241 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 RBAKQ9NYW8 714 aaPredicted RBP9.45□□□□□ -0.9
SNHG3-201ENST00000413987 APEX2Q9UBZ4 518 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 BAG5Q9UL15 447 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 PCDHGA1Q9Y5H4 931 aa9.45□□□□□ -0.9
SNHG3-201ENST00000413987 H0YCG3 227 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 RNGTTO60942 597 aaKnown RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TOM1L1O75674 476 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 DLGAP3O95886 979 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 PNPP00491 289 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CXCL8P10145 99 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 CCL5P13501 91 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 JUPP14923 745 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 OR1G1P47890 313 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ARCN1P48444 511 aaKnown RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ARFIP2P53365 341 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ATN1P54259 1190 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 GMFBP60983 142 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ASPHQ12797 758 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TUBA3CQ13748 450 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 GALNT3Q14435 633 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 EFTUD2Q15029 972 aaKnown RBP eCLIP9.44□□□□□ -0.92e-21■■■■□ 22.3
SNHG3-201ENST00000413987 SNX17Q15036 470 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 AAK1Q2M2I8 961 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 PGS1Q32NB8 556 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 BROXQ5VW32 411 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 RABEPKQ7Z6M1 372 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ADCK1Q86TW2 530 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TMPRSS6Q8IU80 811 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 C12orf56Q8IXR9 622 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 KBTBD2Q8IY47 623 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ARRDC4Q8NCT1 418 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.44□□□□□ -0.9
SNHG3-201ENST00000413987 METTL21AQ8WXB1 218 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 APIPQ96GX9 242 aa9.44□□□□□ -0.9
SNHG3-201ENST00000413987 NECAB3Q96P71 396 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms