RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CALR3Q96L12 384 aaKnown RBP18.9■□□□□ 0.62
TRIM56-202ENST00000412507 SMIM14Q96QK8 99 aa18.9■□□□□ 0.62
TRIM56-202ENST00000412507 DESI2Q9BSY9 194 aa18.9■□□□□ 0.62
TRIM56-202ENST00000412507 APOOQ9BUR5 198 aa18.9■□□□□ 0.62
TRIM56-202ENST00000412507 SEPT10Q9P0V9 454 aa18.9■□□□□ 0.62
TRIM56-202ENST00000412507 KLK13Q9UKR3 277 aa18.9■□□□□ 0.62
TRIM56-202ENST00000412507 PNMA8BQ9ULN7 279 aaPredicted RBP18.9■□□□□ 0.62
TRIM56-202ENST00000412507 CHKBQ9Y259 395 aa18.9■□□□□ 0.62
TRIM56-202ENST00000412507 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRIM56-202ENST00000412507 RP1P56715 2156 aa18.9■□□□□ 0.62
TRIM56-202ENST00000412507 hCG_1818297A0A087WSY0 165 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 A0A0U1RQJ8 604 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 NPIPB15A6NHN6 443 aaPredicted RBP18.89■□□□□ 0.61
TRIM56-202ENST00000412507 GOLGA6L6A8MZA4 724 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 H3BM21 787 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 TRIM38O00635 465 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 HEXIM1O94992 359 aaKnown RBP18.89■□□□□ 0.61
TRIM56-202ENST00000412507 ALPIP09923 528 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 GIMD1P0DJR0 217 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 PECAM1P16284 738 aaPredicted RBP18.89■□□□□ 0.61
TRIM56-202ENST00000412507 LHCGRP22888 699 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 NFKBIAP25963 317 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 MACC1Q6ZN28 852 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 RBFAQ8N0V3 343 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 EXD1Q8NHP7 514 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 RBM41Q96IZ5 413 aaKnown RBP18.89■□□□□ 0.61
TRIM56-202ENST00000412507 COQ10AQ96MF6 247 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 MCCC1Q96RQ3 725 aaPredicted RBP18.89■□□□□ 0.61
TRIM56-202ENST00000412507 TDRD1Q9BXT4 1180 aaKnown RBP18.89■□□□□ 0.61
TRIM56-202ENST00000412507 TCEAL2Q9H3H9 227 aaPredicted RBP18.89■□□□□ 0.61
TRIM56-202ENST00000412507 PPIL1Q9Y3C6 166 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 OR1A2Q9Y585 309 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 SCN8AQ9UQD0 1980 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 FRYQ5TBA9 3013 aa18.89■□□□□ 0.61
TRIM56-202ENST00000412507 A0A0U1RQS6 177 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 SIGLEC6O43699 453 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 DKK1O94907 266 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 MMP2P08253 660 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 JUNDP17535 347 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 TGM2P21980 687 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 CD86P42081 329 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 EPHB1P54762 984 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 MTM1Q13496 603 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 ARHGEF7Q14155 803 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 USP45Q70EL2 814 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 BZW1Q7L1Q6 419 aaKnown RBP18.88■□□□□ 0.61
TRIM56-202ENST00000412507 TSPAN33Q86UF1 283 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 PELI3Q8N2H9 469 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 ZNF548Q8NEK5 533 aaPredicted RBP18.88■□□□□ 0.61
TRIM56-202ENST00000412507 OR4C6Q8NH72 309 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 KIAA1524Q8TCG1 905 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 BRD8Q9H0E9 1235 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 PCDHA3Q9Y5H8 950 aa18.88■□□□□ 0.61
TRIM56-202ENST00000412507 A0A0J9YYE9 177 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 GRID2IPA4D2P6 1211 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 PRLP01236 227 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 TRBC1P01850 177 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 CA4P22748 312 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 CTNNA1P35221 906 aaKnown RBP18.87■□□□□ 0.61
TRIM56-202ENST00000412507 HNF1BP35680 557 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 NR2C2P49116 596 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 PEX5P50542 639 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 SKOR1P84550 965 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 ZNF211Q13398 564 aaPredicted RBP18.87■□□□□ 0.61
TRIM56-202ENST00000412507 NFATC4Q14934 902 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 PROX2Q3B8N5 592 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 NYAP1Q6ZVC0 841 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 HSD11B1LQ7Z5J1 315 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 PHACTR4Q8IZ21 702 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 NDUFAF2Q8N183 169 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 CBARPQ8N350 705 aaPredicted RBP18.87■□□□□ 0.61
TRIM56-202ENST00000412507 LRRC57Q8N9N7 239 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 HAUS1Q96CS2 278 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 NUS1Q96E22 293 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 AGAP3Q96P47 875 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 HEMGNQ9BXL5 484 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 PCDH9Q9HC56 1237 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 TRIM10Q9UDY6 481 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 APOBEC3BQ9UH17 382 aaKnown RBP18.87■□□□□ 0.61
TRIM56-202ENST00000412507 NEUROG3Q9Y4Z2 214 aa18.87■□□□□ 0.61
TRIM56-202ENST00000412507 MACROD2A1Z1Q3 448 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 NEMP2A6NFY4 417 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 SCAMP1O15126 338 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 AQP9O43315 295 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 ETV3P41162 512 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 ACADVLP49748 655 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 PPARDQ03181 441 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 KIF5AQ12840 1032 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 PRKD1Q15139 912 aaPredicted RBP18.86■□□□□ 0.61
TRIM56-202ENST00000412507 PPP2R5EQ16537 467 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 HS1BP3Q53T59 392 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 FAXCQ5TGI0 409 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 ESRP1Q6NXG1 681 aaKnown RBP18.86■□□□□ 0.61
TRIM56-202ENST00000412507 CRTC1Q6UUV9 634 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 ENPP7Q6UWV6 458 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 ZC3H18Q86VM9 953 aaKnown RBP18.86■□□□□ 0.61
TRIM56-202ENST00000412507 LPCAT1Q8NF37 534 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 LMX1AQ8TE12 382 aa18.86■□□□□ 0.61
TRIM56-202ENST00000412507 TFB1MQ8WVM0 346 aaKnown RBP18.86■□□□□ 0.61
TRIM56-202ENST00000412507 BTN2A2Q8WVV5 523 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms