RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 TCEA2Q15560 299 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 PRRT3Q5FWE3 981 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 RALGPS1Q5JS13 557 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 HES3Q5TGS1 186 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 LRRC38Q5VT99 294 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 TIGD7Q6NT04 549 aaPredicted RBP19.11■□□□□ 0.65
SF3A1-202ENST00000411423 ENPP7Q6UWV6 458 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 CCDC13Q8IYE1 715 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 GALNT15Q8N3T1 639 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 PAF1Q8N7H5 531 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 CNTD1Q8N815 330 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 MDM1Q8TC05 714 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 MCCC1Q96RQ3 725 aaPredicted RBP19.11■□□□□ 0.65
SF3A1-202ENST00000411423 LGR4Q9BXB1 951 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 PHTF1Q9UMS5 762 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 PPIL1Q9Y3C6 166 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 HEY1Q9Y5J3 304 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 CSNK1G3Q9Y6M4 447 aa19.11■□□□□ 0.65
SF3A1-202ENST00000411423 TMEM202A6NGA9 273 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 H3BM21 787 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 KCNK1O00180 336 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 TOR1BO14657 336 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 C1SP09871 688 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 TSHRP16473 764 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 PEX5P50542 639 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 ADCY2Q08462 1091 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 PPIDQ08752 370 aaKnown RBP19.1■□□□□ 0.65
SF3A1-202ENST00000411423 ACOX1Q15067 660 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 TAZQ16635 292 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 ARMC12Q5T9G4 340 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 FAXCQ5TGI0 409 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 DENND2CQ68D51 928 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 RAD9BQ6WBX8 426 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 RHOT1Q8IXI2 618 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 FAM181AQ8N9Y4 354 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 SCRN2Q96FV2 425 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 PDXPQ96GD0 296 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 OLFM3Q96PB7 478 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 CEP41Q9BYV8 373 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 POLR1EQ9GZS1 481 aaKnown RBP19.1■□□□□ 0.65
SF3A1-202ENST00000411423 TTLL3Q9Y4R7 772 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 ALG6Q9Y672 507 aa19.1■□□□□ 0.65
SF3A1-202ENST00000411423 CFAP47Q6ZTR5 3102 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 COL27A1Q8IZC6 1860 aaPredicted RBP19.09■□□□□ 0.65
SF3A1-202ENST00000411423 TMEM8BA6NDV4 472 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 JCHAINP01591 159 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 KRT10P13645 584 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 HNF1BP35680 557 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 TRIM23P36406 574 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 ETV3P41162 512 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 CDKN2BP42772 138 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 SLC1A1P43005 524 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 NOP2P46087 812 aaKnown RBP19.09■□□□□ 0.65
SF3A1-202ENST00000411423 DYNLT1P63172 113 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 DAB2P98082 770 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 PPARDQ03181 441 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 ILKQ13418 452 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 ESRP1Q6NXG1 681 aaKnown RBP19.09■□□□□ 0.65
SF3A1-202ENST00000411423 TMPRSS12Q86WS5 348 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 VSIG1Q86XK7 387 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 RFX6Q8HWS3 928 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 HID1Q8IV36 788 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 CCDC170Q8IYT3 715 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 CCNYQ8ND76 341 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 BTN2A2Q8WVV5 523 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 OR1E3Q8WZA6 343 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 PANX2Q96RD6 677 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 IL12RB2Q99665 862 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 TDRD1Q9BXT4 1180 aaKnown RBP19.09■□□□□ 0.65
SF3A1-202ENST00000411423 FGF22Q9HCT0 170 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 MRPL40Q9NQ50 206 aaKnown RBP19.09■□□□□ 0.65
SF3A1-202ENST00000411423 SAE1Q9UBE0 346 aaPredicted RBP19.09■□□□□ 0.65
SF3A1-202ENST00000411423 SPASTQ9UBP0 616 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 CHKBQ9Y259 395 aa19.09■□□□□ 0.65
SF3A1-202ENST00000411423 CELSR3Q9NYQ7 3312 aa19.08■□□□□ 0.65
SF3A1-202ENST00000411423 A0A1W2PQ67 120 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 TRABD2BA6NFA1 517 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 NEMP2A6NFY4 417 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 SRRM3A6NNA2 597 aaPredicted RBP19.08■□□□□ 0.64
SF3A1-202ENST00000411423 APOL1O14791 398 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 YY2O15391 372 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 SPOPO43791 374 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 ALPPL2P10696 532 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 MX2P20592 715 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 HK3P52790 923 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 SRP54P61011 504 aaKnown RBP19.08■□□□□ 0.64
SF3A1-202ENST00000411423 IFI35P80217 286 aaPredicted RBP19.08■□□□□ 0.64
SF3A1-202ENST00000411423 TARDBPQ13148 414 aaKnown RBP eCLIP19.08■□□□□ 0.64
SF3A1-202ENST00000411423 PNCKQ6P2M8 343 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 GUSBP11Q6P575 273 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 CRTC1Q6UUV9 634 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 Q6ZVL8 140 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 TECPR1Q7Z6L1 1165 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 PTCD2Q8WV60 388 aaKnown RBP19.08■□□□□ 0.64
SF3A1-202ENST00000411423 KRT35Q92764 455 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 NUS1Q96E22 293 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 DTD2Q96FN9 168 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 TBATAQ96M53 351 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 WDR92Q96MX6 357 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 BOCQ9BWV1 1114 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms