RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 AGKQ53H12 422 aa15.93■□□□□ 0.14
HOXD3-202ENST00000410016 CLEC6AQ6EIG7 209 aa15.93■□□□□ 0.14
HOXD3-202ENST00000410016 RTN4RL1Q86UN2 441 aaPredicted RBP15.93■□□□□ 0.14
HOXD3-202ENST00000410016 CATSPER1Q8NEC5 780 aa15.93■□□□□ 0.14
HOXD3-202ENST00000410016 FUBP3Q96I24 572 aaKnown RBP eCLIP15.93■□□□□ 0.14
HOXD3-202ENST00000410016 PCDHAC1Q9H158 963 aa15.93■□□□□ 0.14
HOXD3-202ENST00000410016 FBXO44Q9H4M3 255 aa15.93■□□□□ 0.14
HOXD3-202ENST00000410016 SP110Q9HB58 689 aa15.93■□□□□ 0.14
HOXD3-202ENST00000410016 IL37Q9NZH6 218 aa15.93■□□□□ 0.14
HOXD3-202ENST00000410016 PRORSD1PA6NEY8 169 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 YWHAQP27348 245 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 PRAMEP78395 509 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 EFEMP1Q12805 493 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 PDAP1Q13442 181 aaKnown RBP15.92■□□□□ 0.14
HOXD3-202ENST00000410016 UNC50Q53HI1 259 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 IL23RQ5VWK5 629 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 REP15Q6BDI9 236 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 C8orf82Q6P1X6 216 aaPredicted RBP15.92■□□□□ 0.14
HOXD3-202ENST00000410016 ZNF549Q6P9A3 640 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 SPATA24Q86W54 205 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 IFNL1Q8IU54 200 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 AFAP1L2Q8N4X5 818 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 TBATAQ96M53 351 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 SPC25Q9HBM1 224 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 CD300AQ9UGN4 299 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 CRYL1Q9Y2S2 319 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 AP4B1Q9Y6B7 739 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 DOCK4Q8N1I0 1966 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 DRGXA6NNA5 263 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 C8BP07358 591 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 TSPAN8P19075 237 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 NFKB2Q00653 900 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 MAPRE2Q15555 327 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 TRIM71Q2Q1W2 868 aaKnown RBP15.92■□□□□ 0.14
HOXD3-202ENST00000410016 ATP6V1E2Q96A05 226 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 C3orf30Q96M34 536 aa15.92■□□□□ 0.14
HOXD3-202ENST00000410016 FAM92AA1XBS5 289 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 GPC4O75487 556 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SUPT7LO94864 414 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SNRPB2P08579 225 aaKnown RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 ZNF26P17031 533 aaPredicted RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 FDXRP22570 491 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 ZNF157P51786 506 aaPredicted RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 CDKL1Q00532 357 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 GK3PQ14409 553 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 KCNA10Q16322 511 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 FUNDC1Q8IVP5 155 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 DCP1BQ8IZD4 617 aaKnown RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 TTC9BQ8N6N2 239 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SNX31Q8N9S9 440 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 OR52K2Q8NGK3 314 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 OR9I1Q8NGQ6 314 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 GPR152Q8TDT2 470 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 BTN2A3PQ96KV6 586 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 FBRSL1Q9HCM7 1045 aaKnown RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 ATP6AP2A0A1C7CYW4 349 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 MUSKO15146 869 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SEPT4O43236 478 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 ATP6AP2O75787 350 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 CD1DP15813 335 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 HERVK_113P63132 956 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SH3BP2P78314 561 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 RHDQ02161 417 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 IL10RBQ08334 325 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 TRIM32Q13049 653 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SERINC3Q13530 473 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 PTPRCAPQ14761 206 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 NFE2Q16621 373 aaPredicted RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 RAP1GAP2Q684P5 730 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 CCSAPQ6IQ19 270 aaPredicted RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 FAM45BPQ6NSW5 357 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SATL1Q86VE3 508 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 FAM45AQ8TCE6 357 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 TOP1MTQ969P6 601 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 MYEOVQ96EZ4 313 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 SH3GL3Q99963 347 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 ERVK-6Q9BXR3 956 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 TRIM4Q9C037 500 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 EPB41L1Q9H4G0 881 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 Q9H521 79 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 RGS18Q9NS28 235 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 TRMT13Q9NUP7 481 aaKnown RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 EPS15L1Q9UBC2 864 aa15.91■□□□□ 0.14
HOXD3-202ENST00000410016 CNOT11Q9UKZ1 510 aaKnown RBP15.91■□□□□ 0.14
HOXD3-202ENST00000410016 NRP2O60462 931 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 TFAP2AP05549 437 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 ETFBP38117 255 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 PBX3P40426 434 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 ACADVLP49748 655 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 POLD3Q15054 466 aaPredicted RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 CLLU1OSQ5K130 101 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 CIR1Q86X95 450 aaPredicted RBP15.9■□□□□ 0.14
HOXD3-202ENST00000410016 COLGALT2Q8IYK4 626 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 ATP6V0D2Q8N8Y2 350 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 ATAD1Q8NBU5 361 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 KLHDC9Q8NEP7 349 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 SEMA3CQ99985 751 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 SLC25A23Q9BV35 468 aa15.9■□□□□ 0.14
HOXD3-202ENST00000410016 SPAG4Q9NPE6 437 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms