RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 LIG3P49916 1009 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 CCR5P51681 352 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 CALCOCO2Q13137 446 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 SRSF5Q13243 272 aaKnown RBP20.67■□□□□ 0.9
C4orf48-202ENST00000409860 MORF4L2Q15014 288 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 CNGA3Q16281 694 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 LRRC66Q68CR7 880 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 DUPD1Q68J44 220 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 CRTC1Q6UUV9 634 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 LPCAT2Q7L5N7 544 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 SHOC2Q9UQ13 582 aa20.67■□□□□ 0.9
C4orf48-202ENST00000409860 PSMD11O00231 422 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 LZTS3O60299 673 aaPredicted RBP20.66■□□□□ 0.9
C4orf48-202ENST00000409860 MMP20O60882 483 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 LILRB5O75023 590 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 FSBPO95073 299 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 GRIA1P42261 906 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 ITGA8P53708 1063 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 PPP2CBP62714 309 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 PPP2CAP67775 309 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 SLC7A5Q01650 507 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 PTPRRQ15256 657 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 SEL1L3Q68CR1 1132 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 LRRC8BQ6P9F7 803 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 LIPIQ6XZB0 460 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 GLT6D1Q7Z4J2 308 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 TSPAN33Q86UF1 283 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 FOXJ1Q92949 421 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 GPR63Q9BZJ6 419 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 IRF2BPLQ9H1B7 796 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 ZFYVE1Q9HBF4 777 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 XAB2Q9HCS7 855 aaKnown RBP20.66■□□□□ 0.9
C4orf48-202ENST00000409860 PIH1D1Q9NWS0 290 aaKnown RBP20.66■□□□□ 0.9
C4orf48-202ENST00000409860 WHRNQ9P202 907 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 ANAPC5Q9UJX4 755 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 SPO11Q9Y5K1 396 aa20.66■□□□□ 0.9
C4orf48-202ENST00000409860 IGLON5A6NGN9 336 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 MEI4A8MW99 385 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 TM7SF2O76062 418 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 SLU7O95391 586 aaKnown RBP20.65■□□□□ 0.9
C4orf48-202ENST00000409860 SLC4A1P02730 911 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 MLNP12872 115 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 C6P13671 934 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 TPH1P17752 444 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 SGCGQ13326 291 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 ELF2Q15723 593 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 TMEM259Q4ZIN3 620 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 SPDYCQ5MJ68 293 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 DENND2CQ68D51 928 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 HIBCHQ6NVY1 386 aaPredicted RBP20.65■□□□□ 0.9
C4orf48-202ENST00000409860 LYSMD3Q7Z3D4 306 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 LRRN4CLQ8ND94 238 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 PRSS33Q8NF86 280 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 FRMD8Q9BZ67 464 aaPredicted RBP20.65■□□□□ 0.9
C4orf48-202ENST00000409860 DUSP15Q9H1R2 295 aaPredicted RBP20.65■□□□□ 0.9
C4orf48-202ENST00000409860 KCNH6Q9H252 994 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 BFARQ9NZS9 450 aa20.65■□□□□ 0.9
C4orf48-202ENST00000409860 ZFR2Q9UPR6 939 aaKnown RBP20.65■□□□□ 0.9
C4orf48-202ENST00000409860 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 METTL12A8MUP2 240 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 GOLGA8MH3BSY2 632 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 RHOBTB1O94844 696 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 CLDN7O95471 211 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 CRTAMO95727 393 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 MAT2AP31153 395 aaKnown RBP20.64■□□□□ 0.89
C4orf48-202ENST00000409860 NUDT1P36639 197 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 STC1P52823 247 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 DRG2P55039 364 aaKnown RBP20.64■□□□□ 0.89
C4orf48-202ENST00000409860 SESN2P58004 480 aaPredicted RBP20.64■□□□□ 0.89
C4orf48-202ENST00000409860 GUCY2DQ02846 1103 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 SIM2Q14190 667 aaPredicted RBP20.64■□□□□ 0.89
C4orf48-202ENST00000409860 ACOX1Q15067 660 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 CDKN3Q16667 212 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 SETMARQ53H47 684 aaPredicted RBP20.64■□□□□ 0.89
C4orf48-202ENST00000409860 ZNF534Q76KX8 674 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 TMEFF1Q8IYR6 380 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 DEFB119Q8N690 84 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 BRSK1Q8TDC3 778 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 SNX19Q92543 992 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 HSPA12BQ96MM6 686 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 SERPINB12Q96P63 405 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 C1QTNF7Q9BXJ2 289 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.64■□□□□ 0.89
C4orf48-202ENST00000409860 PKD2L2Q9NZM6 624 aa20.64■□□□□ 0.89
C4orf48-202ENST00000409860 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.64■□□□□ 0.89
C4orf48-202ENST00000409860 C2orf81A6NN90 581 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 C10orf142B7Z368 130 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 LATO43561 262 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 IGHV4-34P06331 123 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 C1SP09871 688 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 NPY2RP49146 381 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 PTPN5P54829 565 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 PDE1BQ01064 536 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 PTSQ03393 145 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 TCF15Q12870 199 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 LAMB3Q13751 1172 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 SEPT6Q14141 434 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 POU6F1Q14863 301 aa20.63■□□□□ 0.89
C4orf48-202ENST00000409860 TAF1AQ15573 450 aaPredicted RBP20.63■□□□□ 0.89
C4orf48-202ENST00000409860 ZNF284Q2VY69 593 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms