RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.07
LIMS2-205ENST00000409455 C1orf232A0A0U1RR37 186 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 KCNK1O00180 336 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 KPNA4O00629 521 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 TPST1O60507 370 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 ADAMTS4O75173 837 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CNOT3O75175 753 aaKnown RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 DNAJB1P25685 340 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 PGGT1BP53609 377 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CRYBB1P53674 252 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 TMBIM6P55061 237 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 GRSF1Q12849 480 aaKnown RBP eCLIP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 PCBP1Q15365 356 aaKnown RBP eCLIP15.51■□□□□ 0.072e-6■■■■■ 32.7
LIMS2-205ENST00000409455 PKDCCQ504Y2 493 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 OFCC1Q8IZS5 231 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 PDPRQ8NCN5 879 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 PNPT1Q8TCS8 783 aaKnown RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 SLC35F5Q8WV83 523 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 ZUFSPQ96AP4 578 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 SLC39A3Q9BRY0 314 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CASS4Q9NQ75 786 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CHRAC1Q9NRG0 131 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 OAZ3Q9UMX2 235 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CORINQ9Y5Q5 1042 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 AQP12BA6NM10 295 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 GSTT2P0CG29 244 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 GSTT2BP0CG30 244 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 ATP6AP1Q15904 470 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CERCAMQ5T4B2 595 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 TMTC4Q5T4D3 741 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 GDF6Q6KF10 455 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 AQP12AQ8IXF9 295 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CLEC4CQ8WTT0 213 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 TAMM41Q96BW9 452 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 ROPN1LQ96C74 230 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CENPNQ96H22 339 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 SLC45A3Q96JT2 553 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 ZMAT2Q96NC0 199 aaKnown RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 OMDQ99983 421 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 MRPL46Q9H2W6 279 aaKnown RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 NXF3Q9H4D5 531 aaKnown RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 POMKQ9H5K3 350 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 FAM124BQ9H5Z6 455 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-205ENST00000409455 MEAF6Q9HAF1 191 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 RNF19AQ9NV58 838 aa15.51■□□□□ 0.07
LIMS2-205ENST00000409455 CCDC162PA2VCL2 907 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 CLPXO76031 633 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 RASAL1O95294 804 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 ASGR1P07306 291 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 HNRNPLP14866 589 aaKnown RBP eCLIP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 CAPGP40121 348 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 RPS3AP61247 264 aaKnown RBP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 KCNA10Q16322 511 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 PSMD5Q16401 504 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 PITRM1Q5JRX3 1037 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 TAF2Q6P1X5 1199 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 C8orf82Q6P1X6 216 aaPredicted RBP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 FAM131BQ86XD5 332 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 SLC41A1Q8IVJ1 513 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 REM2Q8IYK8 340 aaPredicted RBP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 DHRSXQ8N5I4 330 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 PCYOX1LQ8NBM8 494 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 CD99L2Q8TCZ2 262 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 RIC8BQ9NVN3 520 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 DPP3Q9NY33 737 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 MTF2Q9Y483 593 aaPredicted RBP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 AKAP5P24588 427 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 ATP6V0D1P61421 351 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 BCL2A1Q16548 175 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 PPP1R3AQ16821 1122 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 TSTD2Q5T7W7 516 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 CNSTQ6PJW8 725 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 FRA10AC1Q70Z53 315 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 ACOT1Q86TX2 421 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 OR13F1Q8NGS4 319 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 RNF139Q8WU17 664 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 CCDC138Q96M89 665 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 YTHDF1Q9BYJ9 559 aaKnown RBP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 EML4Q9HC35 981 aaKnown RBP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 SMPD3Q9NY59 655 aaPredicted RBP15.5■□□□□ 0.07
LIMS2-205ENST00000409455 SPATA7Q9P0W8 599 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 SRRDQ9UH36 339 aa15.5■□□□□ 0.07
LIMS2-205ENST00000409455 ERI2A8K979 691 aaKnown RBP15.49■□□□□ 0.07
LIMS2-205ENST00000409455 CPNE6O95741 557 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 AXLP30530 894 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 HLCSP50747 726 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 CCT8P50990 548 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 MAPK10P53779 464 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 RAB10P61026 200 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 NKX3-2P78367 333 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 PRPSAP1Q14558 356 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 STRADAQ7RTN6 431 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 IGFN1Q86VF2 1251 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 SPPL2CQ8IUH8 684 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 TXNDC5Q8NBS9 432 aaKnown RBP15.49■□□□□ 0.07
LIMS2-205ENST00000409455 WNT8BQ93098 351 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 NXNL1Q96CM4 212 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 NRBF2Q96F24 287 aa15.49■□□□□ 0.07
LIMS2-205ENST00000409455 PLEKHA5Q9HAU0 1116 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms