RNA–Protein interactions for RNA: ENST00000409300.5

RAD9B-204, Transcript of RAD9 checkpoint clamp component B, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAD9B, Length 2,732 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD9B-204	ENST00000409300	CSNK1D	P48730	415 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	LIMK2	P53671	638 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	ST8SIA6	P61647	398 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	LAMB3	Q13751	1172 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	ZNF789	Q5FWF6	425 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	PPM1J	Q5JR12	505 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	CDHR3	Q6ZTQ4	885 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	LYSMD3	Q7Z3D4	306 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	ELSPBP1	Q96BH3	223 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	LRCH3	Q96II8	777 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	CEP44	Q9C0F1	390 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	IQCG	Q9H095	443 aa	Known RBP	11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	SUV39H2	Q9H5I1	410 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	SLC17A7	Q9P2U7	560 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	FBXO5	Q9UKT4	447 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	SLC39A10	Q9ULF5	831 aa		11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	SMG5	Q9UPR3	1016 aa	Known RBP	11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	USP15	Q9Y4E8	981 aa	Predicted RBP	11.29	□□□□□ -0.6
RAD9B-204	ENST00000409300	ATG2B	Q96BY7	2078 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	C1orf232	A0A0U1RR37	186 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CCDC162P	A2VCL2	907 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SOX1	O00570	391 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	PRPF4	O43172	522 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SHOX2	O60902	331 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	PRSS56	P0CW18	603 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	HLA-E	P13747	358 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	LPO	P22079	712 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SOX9	P48436	509 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	GRM3	Q14832	879 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SKIV2L	Q15477	1246 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SH2D5	Q6ZV89	423 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	ZC3HC1	Q86WB0	502 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	FRS2	Q8WU20	508 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	PPM1E	Q8WY54	764 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	VOPP1	Q96AW1	172 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CDKN2AIPNL	Q96HQ2	116 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SRPK1	Q96SB4	655 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	FAM167B	Q9BTA0	163 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300		A0A0J9YYE9	177 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CXorf51A	A0A1B0GTR3	108 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	WASH3P	C4AMC7	463 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	STX7	O15400	261 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SLC7A4	O43246	635 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	SOCS5	O75159	536 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	LEFTY1	O75610	366 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	RPP40	O75818	363 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	GSR	P00390	522 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	TRBC1	P01850	177 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	KCNA5	P22460	613 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	ZNF140	P52738	457 aa	Predicted RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	WDR4	P57081	412 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	FNDC3B	Q53EP0	1204 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CNST	Q6PJW8	725 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	LVRN	Q6Q4G3	990 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CILP2	Q8IUL8	1156 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CNTN4	Q8IWV2	1026 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	GPATCH11	Q8N954	259 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CALML6	Q8TD86	181 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	ALKBH8	Q96BT7	664 aa	Known RBP	11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	EID2B	Q96D98	161 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CHFR	Q96EP1	664 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	APOPT1	Q96IL0	206 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	KLHL32	Q96NJ5	620 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	FAM111A	Q96PZ2	611 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	VPS11	Q9H270	941 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	BRD9	Q9H8M2	597 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	NSMCE4A	Q9NXX6	385 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	CRYL1	Q9Y2S2	319 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	ZNF711	Q9Y462	761 aa		11.28	□□□□□ -0.6
RAD9B-204	ENST00000409300	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.27	□□□□□ -0.6
RAD9B-204	ENST00000409300	WDR91	A4D1P6	747 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	TIMM44	O43615	452 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	CLDN7	O95471	211 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	HNF1B	P35680	557 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	OPRD1	P41143	372 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	SLC18A2	Q05940	514 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	UGP2	Q16851	508 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	ARSI	Q5FYB1	569 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	TERB1	Q8NA31	727 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	OR4L1	Q8NH43	312 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	WFIKKN2	Q8TEU8	576 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	GAS2L1	Q99501	681 aa	Predicted RBP	11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	NDN	Q99608	321 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	MFSD1	Q9H3U5	465 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	RHOJ	Q9H4E5	214 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	MAGEE1	Q9HCI5	957 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	SNX15	Q9NRS6	342 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	NLE1	Q9NVX2	485 aa	Predicted RBP	11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	PSD3	Q9NYI0	1048 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	FKBPL	Q9UIM3	349 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	PKP3	Q9Y446	797 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	CD3EAP	O15446	510 aa	Known RBP	11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	GPR39	O43194	453 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	PML	P29590	882 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	CCT5	P48643	541 aa		11.27	□□□□□ -0.61
RAD9B-204	ENST00000409300	CSE1L	P55060	971 aa	Known RBP	11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms