RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 ZNF697Q5TEC3 545 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 ZPBP2Q6X784 338 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 RASAL3Q86YV0 1011 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 PM20D2Q8IYS1 436 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 PCSK9Q8NBP7 692 aaKnown RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 CTDNEP1O95476 244 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 RARAP10276 462 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 TAF1CQ15572 869 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 RTL4Q6ZR62 310 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 USP43Q70EL4 1123 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 THAP5Q7Z6K1 395 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 ZNF354BQ96LW1 612 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 GPN3Q9UHW5 284 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 DCKP27707 260 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 BUD31P41223 144 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 MTHFRP42898 656 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 LRRC69Q6ZNQ3 347 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 OR8H3Q8N146 312 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 ZNF670Q9BS34 389 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 MND1Q9BWT6 205 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 ACE2Q9BYF1 805 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 LRRC19Q9H756 370 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 ABCC13Q9NSE7 274 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 WDR37Q9Y2I8 494 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 RIIAD1A6NNX1 92 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 TSPAN4O14817 238 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 SLC22A2O15244 555 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 MYCP01106 439 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 CTSKP43235 329 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 PLK1P53350 603 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 PTPN5P54829 565 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 SNRPD1P62314 119 aaKnown RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 CREMQ03060 361 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 ATP13A3Q9H7F0 1226 aa12.18□□□□□ -0.46
SHANK2-203ENST00000409161 SEMA4BQ9NPR2 832 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-203ENST00000409161 CNTNAP2Q9UHC6 1331 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 XKRYO14609 159 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 GPIP06744 558 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 HGFP14210 728 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 LAMTOR4Q0VGL1 99 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-203ENST00000409161 FAM153CQ494X1 144 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 BEND5Q7L4P6 421 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 SPG21Q9NZD8 308 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 RAB23Q9ULC3 237 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 MT-CO1P00395 513 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 KCNJ2P63252 427 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ANO7Q6IWH7 933 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 NIPA1Q7RTP0 329 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 IQCF2Q8IXL9 164 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 OR2L5Q8NG80 312 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 BAP1Q92560 729 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 CDADC1Q9BWV3 514 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 BHLHE41Q9C0J9 482 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-203ENST00000409161 DHX33Q9H6R0 707 aaKnown RBP12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ACSS3Q9H6R3 686 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 IRF8Q02556 426 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ZDHHC20Q5W0Z9 365 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 NEK7Q8TDX7 302 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 TAS1R2Q8TE23 839 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 DNAJC18Q9H819 358 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 PRELID1Q9Y255 219 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 PCDHB5Q9Y5E4 795 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ENTPD5O75356 428 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 PRH1P02810 166 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 PGRP06401 933 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
SHANK2-203ENST00000409161 TSPAN18Q96SJ8 248 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ATP13A1Q9HD20 1204 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 FADS2P1A8MWK0 482 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 PDX1P52945 283 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 GPR180Q86V85 440 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 FAM47BQ8NA70 645 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 FATE1Q969F0 183 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 MRPL9Q9BYD2 267 aaKnown RBP12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ABCG2Q9UNQ0 655 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 OR10H1Q9Y4A9 318 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 PCP4L1A6NKN8 68 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 GTPBP1O00178 669 aaKnown RBP12.17□□□□□ -0.46
SHANK2-203ENST00000409161 KDELR1P24390 212 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 LTKP29376 864 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 SV2AQ7L0J3 742 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 BHMTQ93088 406 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 SCGB3A2Q96PL1 93 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 FADS3Q9Y5Q0 445 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 PDCD5O14737 125 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 UPP2O95045 317 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 SERPINA3P01011 423 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 AIF1P55008 147 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ADAM17P78536 824 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ACAP2Q15057 778 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ANKRD26P1Q6NSI1 321 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 ZNF615Q8N8J6 731 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 CIPCQ9C0C6 399 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 IFT46Q9NQC8 304 aa12.17□□□□□ -0.46
SHANK2-203ENST00000409161 IGFBP5P24593 272 aa12.16□□□□□ -0.46
SHANK2-203ENST00000409161 ERP29P30040 261 aaKnown RBP12.16□□□□□ -0.46
SHANK2-203ENST00000409161 ZCCHC23Q6ZST2 131 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms