RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CETPP11597 493 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 ITGA2P17301 1181 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 LHX1P48742 406 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 ATP6V0D1P61421 351 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 TRMT10BQ6PF06 316 aaKnown RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 TBC1D19Q8N5T2 526 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 CANT1Q8WVQ1 401 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 DDX4Q9NQI0 724 aaKnown RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 SAMD4AQ9UPU9 718 aaKnown RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 FARP1Q9Y4F1 1045 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 U3KQV3 271 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 CACNA1FO60840 1977 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 PAICSP22234 425 aaKnown RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 GDF10P55107 478 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 EVX2Q03828 476 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 TNFAIP8L3Q5GJ75 292 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 C10orf120Q5SQS8 335 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 FSTL4Q6MZW2 842 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 DPP10Q8N608 796 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 SLC2A14Q8TDB8 520 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 LRRN4Q8WUT4 740 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 FCGR1BQ92637 280 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 INTS10Q9NVR2 710 aaKnown RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 MTRRQ9UBK8 725 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 FAM50BQ9Y247 325 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 TLL2Q9Y6L7 1015 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 MYH10P35580 1976 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 ILVBLA1L0T0 632 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 MT-ND1P03886 318 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 TMEM62Q0P6H9 643 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 GLT1D1Q96MS3 346 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 SSNA1O43805 119 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 C8BP07358 591 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF7P17097 686 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-202ENST00000409031 RHBDL3P58872 404 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 SLC9A4Q6AI14 798 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 TXLNGYQ9BZA5 131 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 CATSPERZQ9NTU4 200 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 KLQ9UEF7 1012 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 PLOD3O60568 738 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 CYP2C18P33260 490 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 CSNK2BP67870 215 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 CNSTQ6PJW8 725 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 UXS1Q8NBZ7 420 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 CRISPLD1Q9H336 500 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 KLK14Q9P0G3 267 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 RCOR3Q9P2K3 495 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-202ENST00000409031 PCDHA2Q9Y5H9 948 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 DHX15O43143 795 aaKnown RBP17.7■□□□□ 0.42
SMPD4-202ENST00000409031 FMO4P31512 558 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 TCEAL1Q15170 157 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 TMEM214Q6NUQ4 689 aaKnown RBP17.7■□□□□ 0.42
SMPD4-202ENST00000409031 TMPRSS11AQ6ZMR5 421 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF112Q9UJU3 913 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 ABCC6O95255 1503 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 CCRL2O00421 344 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 ERCC2P18074 760 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 PPP2R1BP30154 601 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 DLG2Q15700 870 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 SLC26A9Q7LBE3 791 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 CYP2U1Q7Z449 544 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 OR52K2Q8NGK3 314 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 EDEM1Q92611 657 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF224Q9NZL3 707 aa17.7■□□□□ 0.42
SMPD4-202ENST00000409031 SLC15A5A6NIM6 579 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 YES1P07947 543 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 ODC1P11926 461 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 IKBKEQ14164 716 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 METTL7BQ6UX53 244 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 OR6J1Q8NGC5 347 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 DENND1AQ8TEH3 1009 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 ELMO1Q92556 727 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 PPM1MQ96MI6 270 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 FDXACB1Q9BRP7 624 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-202ENST00000409031 RASSF1Q9NS23 344 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 GDAP2Q9NXN4 497 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 OR12D3Q9UGF7 316 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 OAZ3Q9UMX2 235 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 ULK1O75385 1050 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 NR2F6P10588 404 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 TUBP50607 506 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 POLR2JP52435 117 aaKnown RBP17.69■□□□□ 0.42
SMPD4-202ENST00000409031 GBE1Q04446 702 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 TLR1Q15399 786 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 PRR23CQ6ZRP0 262 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-202ENST00000409031 ZW10O43264 779 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 SLC25A27O95847 323 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 PSMA1P25786 263 aaKnown RBP17.69■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF177Q13360 481 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-202ENST00000409031 DAG1Q14118 895 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 SCIMPQ6UWF3 145 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 SYT12Q8IV01 421 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 CPXM1Q96SM3 734 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 RGL2O15211 777 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 GABBR2O75899 941 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms