RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ALG14Q96F25 216 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 TCF25Q9BQ70 676 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 ASAH2Q9NR71 780 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 PRKAG2Q9UGJ0 569 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 BAIAP2L1Q9UHR4 511 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 CCL16O15467 120 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 ATP6V1G2O95670 118 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 GLUD1P00367 558 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 GJA1P17302 382 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 HOXB8P17481 243 aaPredicted RBP24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 CDKN2DP55273 166 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 MPPE1Q53F39 396 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 MAVSQ7Z434 540 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 BBS7Q8IWZ6 715 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 CPXM2Q8N436 756 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 MDGA1Q8NFP4 955 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 OR4K2Q8NGD2 314 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 UTP4Q969X6 686 aaKnown RBP24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 SORCS3Q9UPU3 1222 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 FCF1Q9Y324 198 aaKnown RBP24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 CAPN14A8MX76 684 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 ANKRD66B4E2M5 251 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 CSPG5O95196 566 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 SLC4A1P02730 911 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 RBP1P09455 135 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 LPOP22079 712 aaPredicted RBP24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 FPGSQ05932 587 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 TRAF2Q12933 501 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 USP4Q13107 963 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 AFTPHQ6ULP2 937 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 BADQ92934 168 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 BTBD10Q9BSF8 475 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 C2orf49Q9BVC5 232 aaPredicted RBP24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 RAP2CQ9Y3L5 183 aa24.71■■□□□ 1.55
DNMT3A-206ENST00000406659 ZNF195O14628 629 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 DIAPH2O60879 1101 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 ATP5F1P24539 256 aaPredicted RBP24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 ABL2P42684 1182 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 ERVFC1P60507 584 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 TUBB3Q13509 450 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 SEMA3AQ14563 771 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 RALGPS1Q5JS13 557 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 PPM1LQ5SGD2 360 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 RETSATQ6NUM9 610 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 SGF29Q96ES7 293 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 RAD9AQ99638 391 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 CCDC106Q9BWC9 280 aa24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 CXXC1Q9P0U4 656 aaPredicted RBP24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 DNMT3BQ9UBC3 853 aaKnown RBP24.7■■□□□ 1.55
DNMT3A-206ENST00000406659 DENND4CQ5VZ89 1909 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 ENO1P06733 434 aaKnown RBP24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 HSPA8P11142 646 aaKnown RBP24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 PFKLP17858 780 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 SLC26A3P40879 764 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 ACAP2Q15057 778 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 TECRLQ5HYJ1 363 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 ATXN7L2Q5T6C5 722 aaPredicted RBP24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 PLPP4Q5VZY2 271 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 TREML1Q86YW5 311 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 APCDD1Q8J025 514 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 CCNYL1Q8N7R7 359 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 EFHBQ8N7U6 833 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 SLC22A17Q8WUG5 538 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 UBXN10Q96LJ8 280 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 TLE6Q9H808 572 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 ACSS2Q9NR19 701 aa24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 INTS10Q9NVR2 710 aaKnown RBP24.7■■□□□ 1.54
DNMT3A-206ENST00000406659 LEFTY2O00292 366 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 PIGNO95427 931 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 CHRNGP07510 517 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 PSMA3P25788 255 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 SLC8A1P32418 973 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 CTNNB1P35222 781 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 STC1P52823 247 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 TYSND1Q2T9J0 566 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 ARL13AQ5H913 290 aaPredicted RBP24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 MPP7Q5T2T1 576 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 ZNF549Q6P9A3 640 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 TPGS1Q6ZTW0 290 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 MOCOSQ96EN8 888 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 SMIM14Q96QK8 99 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 SLC46A2Q9BY10 475 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 POMKQ9H5K3 350 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 COG4Q9H9E3 785 aa24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.69■■□□□ 1.54
DNMT3A-206ENST00000406659 GYG2O15488 501 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 MT-CO1P00395 513 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 FDXRP22570 491 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 MPSTP25325 297 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 BMPR1AP36894 532 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 RPL14P50914 215 aaKnown RBP24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 HK2P52789 917 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 EPHB1P54762 984 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 DNAJB13P59910 316 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 PFKPQ01813 784 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 PRKAA1Q13131 559 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 VWA5B1Q5TIE3 1220 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 EPGNQ6UW88 154 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 RINLQ6ZS11 566 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 TXNDC5Q8NBS9 432 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms