RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 KIAA0408Q6ZU52 694 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 GLT6D1Q7Z4J2 308 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 STRA8Q7Z7C7 330 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 CPEB1Q9BZB8 566 aaKnown RBP21.08■□□□□ 0.97
TPM1-208ENST00000404484 INTS9Q9NV88 658 aaKnown RBP21.08■□□□□ 0.97
TPM1-208ENST00000404484 IL1RAPL1Q9NZN1 696 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 SLC2A6Q9UGQ3 507 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 PCDHB9Q9Y5E1 797 aa21.08■□□□□ 0.97
TPM1-208ENST00000404484 ANKRD36A6QL64 1941 aa21.08■□□□□ 0.96
TPM1-208ENST00000404484 A0A1W2PPM1 405 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 A0A1W2PQ67 120 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 SHISA7A6NL88 538 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 POP4O95707 220 aaKnown RBP21.07■□□□□ 0.96
TPM1-208ENST00000404484 PDHA1P08559 390 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 DLDP09622 509 aaKnown RBP21.07■□□□□ 0.96
TPM1-208ENST00000404484 CHN1P15882 459 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 CD72P21854 359 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 HADHAP40939 763 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 GNGT1P63211 74 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 PRAMEP78395 509 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 QPCTQ16769 361 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 PREPLQ4J6C6 727 aaPredicted RBP21.07■□□□□ 0.96
TPM1-208ENST00000404484 PAF1Q8N7H5 531 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 TMEM105Q8N8V8 129 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 SPOCK2Q92563 424 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 SGSM3Q96HU1 749 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 SHDQ96IW2 340 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 RBBP8Q99708 897 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 CIPCQ9C0C6 399 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 HPS4Q9NQG7 708 aa21.07■□□□□ 0.96
TPM1-208ENST00000404484 MUC6Q6W4X9 2439 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 FOXO6A8MYZ6 492 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.06■□□□□ 0.96
TPM1-208ENST00000404484 ITGA2BP08514 1039 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 CREB1P16220 341 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 ARNTP27540 789 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 LIMK2P53671 638 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 ST8SIA6P61647 398 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 PRKCQQ04759 706 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 RUNX3Q13761 415 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 MROH9Q5TGP6 573 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 TMEM215Q68D42 235 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 NEPROQ6NW34 567 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 CAMK1DQ8IU85 385 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 NDUFAF2Q8N183 169 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 C4orf33Q8N1A6 199 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 OR13J1Q8NGT2 312 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 ACMSDQ8TDX5 336 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 PTPRN2Q92932 1015 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 ZNF641Q96N77 438 aaPredicted RBP21.06■□□□□ 0.96
TPM1-208ENST00000404484 AGAP2Q99490 1192 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 PSAT1Q9Y617 370 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 TRAFD1O14545 582 aaPredicted RBP21.06■□□□□ 0.96
TPM1-208ENST00000404484 RPP40O75818 363 aaKnown RBP21.06■□□□□ 0.96
TPM1-208ENST00000404484 ZWINTO95229 277 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 AOC1P19801 751 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 CCNHP51946 323 aaPredicted RBP21.06■□□□□ 0.96
TPM1-208ENST00000404484 COL4A3Q01955 1670 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 GUCY1A3Q02108 690 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 SLC18A2Q05940 514 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 TERF2Q15554 542 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 TPRG1Q6ZUI0 275 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 C12orf40Q86WS4 652 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 KDM1BQ8NB78 822 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 OR6K2Q8NGY2 324 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 MDM1Q8TC05 714 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 FOXQ1Q9C009 403 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 MAGEE1Q9HCI5 957 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 GTSE1Q9NYZ3 720 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 SLC17A6Q9P2U8 582 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 SLCO3A1Q9UIG8 710 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 MTF2Q9Y483 593 aaPredicted RBP21.06■□□□□ 0.96
TPM1-208ENST00000404484 ARL5AQ9Y689 179 aa21.06■□□□□ 0.96
TPM1-208ENST00000404484 KANSL1LA0AUZ9 987 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 SRRM3A6NNA2 597 aaPredicted RBP21.05■□□□□ 0.96
TPM1-208ENST00000404484 WASH3PC4AMC7 463 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 PIRTP0C851 137 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 LPOP22079 712 aaPredicted RBP21.05■□□□□ 0.96
TPM1-208ENST00000404484 PSMA3P25788 255 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 EIF2DP41214 584 aaKnown RBP21.05■□□□□ 0.96
TPM1-208ENST00000404484 ZNF140P52738 457 aaPredicted RBP21.05■□□□□ 0.96
TPM1-208ENST00000404484 BMPR2Q13873 1038 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 GAB4Q2WGN9 574 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 GALNT7Q86SF2 657 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 OR6P1Q8NGX9 317 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 TTC8Q8TAM2 541 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 APOPT1Q96IL0 206 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 MRGPRX3Q96LB0 322 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 RHOJQ9H4E5 214 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 NLE1Q9NVX2 485 aaPredicted RBP21.05■□□□□ 0.96
TPM1-208ENST00000404484 MKS1Q9NXB0 559 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 ELOVL2Q9NXB9 296 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 SPO11Q9Y5K1 396 aa21.05■□□□□ 0.96
TPM1-208ENST00000404484 TRIM24O15164 1050 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 TM9SF1O15321 606 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 TYROBPO43914 113 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 PIGNO95427 931 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 PRKCGP05129 697 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 CCNFP41002 786 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 POLD2P49005 469 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms