RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 PAK4O96013 591 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 MSNP26038 577 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 SERPINA4P29622 427 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 HSPA9P38646 679 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 ITKQ08881 620 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 XRCC4Q13426 336 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 ERAP2Q6P179 960 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 GCNT7Q6ZNI0 430 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 BZW1Q7L1Q6 419 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 PTAR1Q7Z6K3 402 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 ZSWIM9Q86XI8 627 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 BBS5Q8N3I7 341 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 KDF1Q8NAX2 398 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 OR13H1Q8NG92 308 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 SLC35B2Q8TB61 432 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 CXorf40AQ8TE69 158 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 GATA6Q92908 595 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 CNDP2Q96KP4 475 aaKnown RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 NUDCD1Q96RS6 583 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 NAPGQ99747 312 aaPredicted RBP17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 SEMA3CQ99985 751 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 BRD8Q9H0E9 1235 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 SUV39H2Q9H5I1 410 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 KLK13Q9UKR3 277 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 ATP8A1Q9Y2Q0 1164 aa17.99■□□□□ 0.47
THUMPD2-202ENST00000403537 TSPAN11A1L157 253 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 NEMP2A6NFY4 417 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 HACD1B0YJ81 288 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 H3BM21 787 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 TM7SF2O76062 418 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 ALPPL2P10696 532 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 CD68P34810 354 aaPredicted RBP17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 AP1S1P61966 158 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 HNRNPKP61978 463 aaKnown RBP eCLIP17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 POLR2LP62875 67 aaKnown RBP17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 ILKQ13418 452 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 SNX1Q13596 522 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 LONRF2Q1L5Z9 754 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 ALG1LQ6GMV1 187 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 DARS2Q6PI48 645 aaKnown RBP17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 Q6ZSR6 202 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 NYAP1Q6ZVC0 841 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 CDKL3Q8IVW4 592 aaPredicted RBP17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 ZNF567Q8N184 647 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 RASGEF1CQ8N431 466 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 EID2Q8N6I1 236 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 PNPLA1Q8N8W4 532 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 ARRDC2Q8TBH0 407 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 HTR3CQ8WXA8 447 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 C16orf45Q96MC5 204 aaPredicted RBP17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 FZD3Q9NPG1 666 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 SCUBE2Q9NQ36 999 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 EVA1BQ9NVM1 165 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 TOR4AQ9NXH8 423 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 CA5BQ9Y2D0 317 aa17.98■□□□□ 0.47
THUMPD2-202ENST00000403537 A0A1W2PQ67 120 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 GOLGA8CPA6NN73 597 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 RIOK3O14730 519 aaKnown RBP17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 KCNN4O15554 427 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 LIASO43766 372 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 NEBLO76041 1014 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 PRKCGP05129 697 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 MMP2P08253 660 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 TIMP2P16035 220 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 ITIH2P19823 946 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 NFKBIAP25963 317 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 GDF10P55107 478 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 CLDN2P57739 230 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 YPEL5P62699 121 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 TRAF2Q12933 501 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 BNIP3Q12983 259 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 PTK2BQ14289 1009 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 TMEM52BQ4KMG9 183 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 TEX44Q53QW1 395 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 SYT10Q6XYQ8 523 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 TMPRSS7Q7RTY8 843 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 KANSL1Q7Z3B3 1105 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 TTC13Q8NBP0 860 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 PBKQ96KB5 322 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 BMFQ96LC9 184 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 TMEM121Q9BTD3 319 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 POLR1EQ9GZS1 481 aaKnown RBP17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 USP29Q9HBJ7 922 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 GPR27Q9NS67 375 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 GGT7Q9UJ14 662 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 ITM2BQ9Y287 266 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 PCDHGC4Q9Y5F7 938 aa17.97■□□□□ 0.47
THUMPD2-202ENST00000403537 MAP1BP46821 2468 aaKnown RBP17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 COL5A1P20908 1838 aaPredicted RBP17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 SPTY2D1-AS1A0A0U1RR47 76 aa17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 CTAGE9A4FU28 777 aa17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 CFAP69A5D8W1 941 aa17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 SPINT1O43278 529 aa17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 NFKB1P19838 968 aa17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 ETF1P62495 437 aaKnown RBP17.96■□□□□ 0.47
THUMPD2-202ENST00000403537 BCL2L1Q07817 233 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms