RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ASTE1Q2TB18 679 aaPredicted RBP12.42□□□□□ -0.42
PRAME-204ENST00000403441 SCYL2Q6P3W7 929 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 XKR5Q6UX68 686 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 CYP4V2Q6ZWL3 525 aaPredicted RBP12.42□□□□□ -0.42
PRAME-204ENST00000403441 UMODL1-AS1Q8N2C9 162 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 PYROXD2Q8N2H3 581 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 PAF1Q8N7H5 531 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 Q8N9G6 341 aaPredicted RBP12.42□□□□□ -0.42
PRAME-204ENST00000403441 NETO2Q8NC67 525 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 RNF214Q8ND24 703 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 SGF29Q96ES7 293 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 PDXPQ96GD0 296 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 ZNF641Q96N77 438 aaPredicted RBP12.42□□□□□ -0.42
PRAME-204ENST00000403441 TUBGCP5Q96RT8 1024 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.423e-19■■■□□ 17.8
PRAME-204ENST00000403441 MAGEB5Q9BZ81 275 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 KLC2Q9H0B6 622 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 LRRN3Q9H3W5 708 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 LHX3Q9UBR4 397 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 ATP8A1Q9Y2Q0 1164 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 LOXL2Q9Y4K0 774 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 DGKBQ9Y6T7 804 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 HECTD1Q9ULT8 2610 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 A0A1W2PQM1 296 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 PYCARD-AS1I3L0S3 204 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 CACNB4O00305 520 aaPredicted RBP12.41□□□□□ -0.42
PRAME-204ENST00000403441 NVLO15381 856 aaKnown RBP12.41□□□□□ -0.42
PRAME-204ENST00000403441 WISP1O95388 367 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 TNFP01375 233 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 ITGB2P05107 769 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 HGFP14210 728 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 GLB1P16278 677 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 KELP23276 732 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 SERPINA4P29622 427 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 AGERQ15109 404 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 TDRD12Q587J7 1177 aaKnown RBP12.41□□□□□ -0.42
PRAME-204ENST00000403441 CERCAMQ5T4B2 595 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 TAF8Q7Z7C8 310 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 ZSCAN1Q8NBB4 408 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 OR56A4Q8NGH8 313 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 SUV39H2Q9H5I1 410 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 ATP13A3Q9H7F0 1226 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 APPL1Q9UKG1 709 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 SCINQ9Y6U3 715 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 BOD1L1Q8NFC6 3051 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 LRP4O75096 1905 aa12.41□□□□□ -0.42
PRAME-204ENST00000403441 SSU72P8A0A1W2PR75 194 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 WASH4PA8MWX3 477 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 TMCO5BA8MYB1 307 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 B4DGG1 531 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 EFSO43281 561 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 ATMINO43313 823 aaPredicted RBP12.4□□□□□ -0.42
PRAME-204ENST00000403441 SFTPCP11686 197 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 PNLIPP16233 465 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 HTR7P34969 479 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 KIAA1024LP59773 190 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 ARHGEF7Q14155 803 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 CYTH1Q15438 398 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 TGIF1Q15583 401 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 MANEAQ5SRI9 462 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 DCUN1D2Q6PH85 259 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 SPRED1Q7Z699 444 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 FAM46DQ8NEK8 389 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 GPR156Q8NFN8 814 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 CPLX3Q8WVH0 158 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 CMKLR1Q99788 373 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 TRIM7Q9C029 511 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 AKAP7Q9P0M2 348 aaPredicted RBP12.4□□□□□ -0.42
PRAME-204ENST00000403441 CNOT8Q9UFF9 292 aaKnown RBP12.4□□□□□ -0.42
PRAME-204ENST00000403441 FZD10Q9ULW2 581 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 PCDHB11Q9Y5F2 797 aa12.4□□□□□ -0.42
PRAME-204ENST00000403441 TLN1Q9Y490 2541 aaKnown RBP12.39□□□□□ -0.43
PRAME-204ENST00000403441 PRAMEF33A0A0G2JMD5 474 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 CFAP69A5D8W1 941 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
PRAME-204ENST00000403441 ARHGAP6O43182 974 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 NOBOXO60393 691 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 PRAMEF10O60809 474 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 PRAMEF11O60813 436 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 MFAP3LO75121 409 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 CYP1A2P05177 515 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 ELFN1P0C7U0 828 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 KRT10P13645 584 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 CSRP3P50461 194 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 TPI1P60174 286 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
PRAME-204ENST00000403441 MAP9Q49MG5 647 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 C14orf28Q4W4Y0 310 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 PHF19Q5T6S3 580 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 CAMK1DQ8IU85 385 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 NIPA2Q8N8Q9 360 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 EXD3Q8N9H8 876 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 PLA2G15Q8NCC3 412 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 OR8K1Q8NGG5 319 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 KIAA1524Q8TCG1 905 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 OR1E3Q8WZA6 343 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 EXTL1Q92935 676 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms