RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ASNSP08243 561 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 TCF4P15884 667 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 KRT4P19013 534 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 TNNI1P19237 187 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 RPS6KA3P51812 740 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MAGOHP61326 146 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FGL2Q14314 439 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FAM69AQ5T7M9 428 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MIS18BP1Q6P0N0 1132 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FRMD1Q8N878 549 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 POMGNT2Q8NAT1 580 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MAGOHBQ96A72 148 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 EFHD2Q96C19 240 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 PLPPR2Q96GM1 343 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FAM83CQ9BQN1 747 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 NAA11Q9BSU3 229 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 POLR3BQ9NW08 1133 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 LMCD1Q9NZU5 365 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 LARSQ9P2J5 1176 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 CGGBP1Q9UFW8 167 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FBXL21Q9UKT6 434 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 ITGA11Q9UKX5 1188 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 COLQQ9Y215 455 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 GRIN2DO15399 1336 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTPRJQ12913 1337 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FCHO1O14526 889 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 WDR46O15213 610 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MSCO60682 206 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 ICAM1P05362 532 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 PGK2P07205 417 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 CREB1P16220 341 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 NR1D1P20393 614 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 AVPR2P30518 371 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 AARSP49588 968 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 HARS2P49590 506 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MFAP3P55082 362 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SP2Q02086 613 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SEC23BQ15437 767 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 AANATQ16613 207 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 GLE1Q53GS7 698 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FSCBQ5H9T9 825 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 FKBP1CQ5VVH2 108 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 ESRP1Q6NXG1 681 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SLC39A4Q6P5W5 647 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SCFD2Q8WU76 684 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 CORO2AQ92828 525 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 RGMAQ96B86 450 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 IQCDQ96DY2 449 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 LRCH3Q96II8 777 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 C11orf70Q9BRQ4 267 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SLC5A7Q9GZV3 580 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SCPEP1Q9HB40 452 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 RXFP1Q9HBX9 757 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 OLFML3Q9NRN5 406 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 CTNNAL1Q9UBT7 734 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 DBR1Q9UK59 544 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SLC8A2Q9UPR5 921 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 PFASO15067 1338 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 OR6C76A6NM76 312 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 DNALI1O14645 258 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 ACTL6BO94805 426 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 EDN1P05305 212 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 NR3C2P08235 984 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 CHRNB2P17787 502 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 NLRP11P59045 1033 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 ZNF844Q08AG5 666 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 IL10RAQ13651 578 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 TUBA3CQ13748 450 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTK6Q13882 451 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 LEXMQ3ZCV2 418 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 INO80CQ6PI98 192 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 LRFN4Q6PJG9 635 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 NLRX1Q86UT6 975 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 RASGEF1CQ8N431 466 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 LMO3Q8TAP4 145 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 KAT2BQ92831 832 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MIEF2Q96C03 454 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 RPGRIP1Q96KN7 1286 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 IFT74Q96LB3 600 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 SPSB2Q99619 263 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 PRDM12Q9H4Q4 367 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 CCDC86Q9H6F5 360 aaKnown RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MAGEE1Q9HCI5 957 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 TUFT1Q9NNX1 390 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 GDF3Q9NR23 364 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 KLHL14Q9P2G3 628 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 TTC7AQ9ULT0 858 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 GINS2Q9Y248 185 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 PDE4DIPQ5VU43 2346 aa6.27□□□□□ -1.41
TRAPPC13-202ENST00000399438 MYH11P35749 1972 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 A0A087WZ62 844 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 MFSD2BA6NFX1 497 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 HSBP1L1C9JCN9 74 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 ABLIM1O14639 778 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 CYC1P08574 325 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 CLEC2LP0C7M8 214 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 PTX3P26022 381 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 CTNNA2P26232 953 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 HTR2BP41595 481 aa6.26□□□□□ -1.41
TRAPPC13-202ENST00000399438 RPS16P62249 146 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms