RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GMIPQ9P107 970 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 FFAR2O15552 330 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 SCN2BO60939 215 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 FKBP6O75344 327 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ERAL1O75616 437 aaKnown RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CBX6O95503 412 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ADRA1DP25100 572 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 TBX2Q13207 712 aaPredicted RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 PEX6Q13608 980 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ACAP1Q15027 740 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 TMEM63BQ5T3F8 832 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 TAF8Q7Z7C8 310 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 KRT73Q86Y46 540 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 JSRP1Q96MG2 331 aaPredicted RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF624Q9P2J8 865 aaPredicted RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ZMPSTE24O75844 475 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 PIK3R1P27986 724 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 MAT2AP31153 395 aaKnown RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 PRKAA2P54646 552 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 POMZP3Q6PJE2 187 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 AFTPHQ6ULP2 937 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 STAG3L4Q8TBR4 150 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CACNA1FO60840 1977 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 A0A0A0MRY4 1105 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 NRP1O14786 923 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 SGTAO43765 313 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CORO1AP31146 461 aaKnown RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 IL17AQ16552 155 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ECM1Q16610 540 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CDC73Q6P1J9 531 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 LPCAT2Q7L5N7 544 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 KATNAL2Q8IYT4 538 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF276Q8N554 614 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF671Q8TAW3 534 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 DNAJC19Q96DA6 116 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 SPATA13Q96N96 652 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 FAIM2Q9BWQ8 316 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 CXorf56Q9H5V9 222 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 POLMQ9NP87 494 aaPredicted RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 L1RE1Q9UN81 338 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 SESN1Q9Y6P5 492 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 IQCMA0A1B0GVH7 501 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 TMEM191CA6NGB0 347 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 STBD1O95210 358 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 RPL14P50914 215 aaKnown RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 ZNF844Q08AG5 666 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 FRG1Q14331 258 aaKnown RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 EMID1Q96A84 441 aaPredicted RBP14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 PWWP2AQ96N64 755 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 GRIP2Q9C0E4 1043 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 REEP1Q9H902 201 aa14.28□□□□□ -0.12
PCDHA11-201ENST00000398640 PROCP04070 461 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 H2AFXP16104 143 aaPredicted RBP14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 GSTM5P46439 218 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 TPGS2Q68CL5 300 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 BHLHE22Q8NFJ8 381 aaPredicted RBP14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 STARD8Q92502 1023 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 DCUN1D5Q9BTE7 237 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 FUCA2Q9BTY2 467 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 WRAP53Q9BUR4 548 aaKnown RBP14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 PAIP2BQ9ULR5 123 aaKnown RBP14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 TNPO3Q9Y5L0 923 aaKnown RBP14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 C4AP0C0L4 1744 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 COL6A1P12109 1028 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 RPL4P36578 427 aaKnown RBP14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 TEAD4Q15561 434 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 FAM187BQ17R55 369 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 CD84Q9UIB8 345 aa14.27□□□□□ -0.12
PCDHA11-201ENST00000398640 GCATO75600 419 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 RAVER1Q8IY67 606 aaKnown RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 ZCCHC9Q8N567 271 aaKnown RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 HIC2Q96JB3 615 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 MFSD14AQ96MC6 490 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 KLHL5Q96PQ7 755 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 TTLL2Q9BWV7 592 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 ELL3Q9HB65 397 aaPredicted RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 CNGB3Q9NQW8 809 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 LRATO95237 230 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 CSF2RAP15509 400 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 ZNF143P52747 638 aaPredicted RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 CCNIQ14094 377 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 PPP1R26Q5T8A7 1209 aaPredicted RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 POLNQ7Z5Q5 900 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 DENND6AQ8IWF6 608 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 NKX2-4Q9H2Z4 354 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 TOR4AQ9NXH8 423 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 CENPXA8MT69 81 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 FOSL2P15408 326 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 C4BPBP20851 252 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 MLLT1Q03111 559 aaPredicted RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 TRMT5Q32P41 509 aaKnown RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 ACBD6Q9BR61 282 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 DGCR6LQ9BY27 220 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 TNKS2Q9H2K2 1166 aa14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 SUCOQ9UBS9 1254 aaKnown RBP14.27□□□□□ -0.13
PCDHA11-201ENST00000398640 PACSIN3Q9UKS6 424 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms