RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 UBP1Q9NZI7 540 aa8.3□□□□□ -1.08
TCF4-203ENST00000398339 MTF2Q9Y483 593 aaPredicted RBP8.3□□□□□ -1.08
TCF4-203ENST00000398339 NOX1Q9Y5S8 564 aa8.3□□□□□ -1.08
TCF4-203ENST00000398339 A0A087X1B8 175 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 DHRS12A0PJE2 317 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 K7EPI3 171 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 M0QYT0 321 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 NCAM2O15394 837 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CLOCKO15516 846 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 MTSS1O43312 755 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 SNAP91O60641 907 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 BAIAP3O94812 1187 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 C7P10643 843 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 IL10P22301 178 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 ATP4BP51164 291 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 KPNA2P52292 529 aaKnown RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 TAS2R39P59534 338 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 IGBP1P78318 339 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 BNIP3Q12983 259 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 NME3Q13232 169 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CTBP1Q13363 440 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 INPP5AQ14642 412 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 NAPEPLDQ6IQ20 393 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 ABRAXAS1Q6UWZ7 409 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 KCTD8Q6ZWB6 473 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 SPRED1Q7Z699 444 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 SIX6OS1Q8N1H7 587 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CRYBG2Q8N1P7 616 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 NPWQ8N729 165 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CHPT1Q8WUD6 406 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CENPNQ96H22 339 aaPredicted RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 ELMO2Q96JJ3 720 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 SLC45A3Q96JT2 553 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 GPATCH1Q9BRR8 931 aaKnown RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 UQCC2Q9BRT2 126 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 SMARCAD1Q9H4L7 1026 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 MRM3Q9HC36 420 aaKnown RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 PALMDQ9NP74 551 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CD320Q9NPF0 282 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
TCF4-203ENST00000398339 TMEM9Q9P0T7 183 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 GNPTGQ9UJJ9 305 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 TLL2Q9Y6L7 1015 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 RNF103-CHMP3A0A140T963 221 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 AP3B1O00203 1094 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 NME4O00746 187 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 ACOX3O15254 700 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 XPOTO43592 962 aaKnown RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 SNX2O60749 519 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 RASAL1O95294 804 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CLIC3O95833 236 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 KCNA5P22460 613 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 FASP25445 335 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 DNAJB2P25686 324 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 GRM5P41594 1212 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 SLC26A2P50443 739 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 BMXP51813 675 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 TPI1P60174 286 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 ATP6V0D1P61421 351 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 KCNC4Q03721 635 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 ADIGQ0VDE8 80 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 GRSF1Q12849 480 aaKnown RBP eCLIP8.29□□□□□ -1.08
TCF4-203ENST00000398339 TRIM71Q2Q1W2 868 aaKnown RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 Q3C1V9 767 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 TMEM214Q6NUQ4 689 aaKnown RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 PKN3Q6P5Z2 889 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 RETREG3Q86VR2 466 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 SPPL2CQ8IUH8 684 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 FUNDC1Q8IVP5 155 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CMTR2Q8IYT2 770 aaKnown RBP8.29□□□□□ -1.08
TCF4-203ENST00000398339 SLC2A14Q8TDB8 520 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 WNT8BQ93098 351 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 HDAC11Q96DB2 347 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 FEM1CQ96JP0 617 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 PSKH2Q96QS6 385 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 NEURL2Q9BR09 285 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CEP44Q9C0F1 390 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 CYP4F12Q9HCS2 524 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 PIGVQ9NUD9 493 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 ABCD2Q9UBJ2 740 aa8.29□□□□□ -1.08
TCF4-203ENST00000398339 A8MT66 165 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 TPST1O60507 370 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 NOL3O60936 208 aaKnown RBP8.28□□□□□ -1.08
TCF4-203ENST00000398339 ADAM23O75077 832 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 SULT1C4O75897 302 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 DDX5P17844 614 aaKnown RBP8.28□□□□□ -1.08
TCF4-203ENST00000398339 PRKACBP22694 351 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 PSMA4P25789 261 aaKnown RBP8.28□□□□□ -1.08
TCF4-203ENST00000398339 LMO2P25791 158 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 YWHAQP27348 245 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 TKTP29401 623 aaKnown RBP8.28□□□□□ -1.08
TCF4-203ENST00000398339 ADRA1BP35368 520 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 CAPGP40121 348 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 ZNF280AP59817 542 aaPredicted RBP8.28□□□□□ -1.08
TCF4-203ENST00000398339 TNK2Q07912 1038 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 SEMA3BQ13214 749 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 ATP1A4Q13733 1029 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 PRPSAP1Q14558 356 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 TECRLQ5HYJ1 363 aa8.28□□□□□ -1.08
TCF4-203ENST00000398339 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms