RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 NOTUMQ6P988 496 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 GALNT18Q6P9A2 607 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 CNSTQ6PJW8 725 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 CYP2R1Q6VVX0 501 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 BRI3BPQ8WY22 251 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 TFAP2CQ92754 450 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 TEKT5Q96M29 485 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 KLHL25Q9H0H3 589 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 POMKQ9H5K3 350 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 TRHDEQ9UKU6 1024 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 MRPL42Q9Y6G3 142 aaKnown RBP16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 CCL15-CCL14A0A0B4J2E2 113 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 C9IYK1 514 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 NCAM2O15394 837 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 CD4P01730 458 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 NCAM1P13591 858 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 IGFBP6P24592 240 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 RCVRNP35243 200 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 RAB10P61026 200 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 PRAMEP78395 509 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 GNA12Q03113 381 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 CCL15Q16663 113 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 LAYNQ6UX15 382 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 HDAC11Q96DB2 347 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 ELMO2Q96JJ3 720 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 CNDP2Q96KP4 475 aaKnown RBP16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 GPR78Q96P69 363 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 SACM1LQ9NTJ5 587 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 DUS2Q9NX74 493 aaKnown RBP16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 GDAP2Q9NXN4 497 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 IFT52Q9Y366 437 aa16.04■□□□□ 0.16
CHMP1A-201ENST00000397901 C1orf232A0A0U1RR37 186 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 AKAP10O43572 662 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 MT-CYBP00156 380 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 STMN1P16949 149 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 RPL10P27635 214 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 PRPSAP1Q14558 356 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 NAPEPLDQ6IQ20 393 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 ESRP1Q6NXG1 681 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 IPMKQ8NFU5 416 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 EDEM1Q92611 657 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 ASB9Q96DX5 294 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 ALPK1Q96QP1 1244 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 KIFC1Q9BW19 673 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 OSBPL2Q9H1P3 480 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 NSMCE4AQ9NXX6 385 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 SLC2A6Q9UGQ3 507 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 SNX13Q9Y5W8 968 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 TLL2Q9Y6L7 1015 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 USP17L7P0C7H9 530 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 HOXD8P13378 290 aaPredicted RBP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 CCNA2P20248 432 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 TCEA1P23193 301 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 TRIM25Q14258 630 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 SF3B4Q15427 424 aaKnown RBP eCLIP16.03■□□□□ 0.161e-6■■■□□ 15.3
CHMP1A-201ENST00000397901 PPP1R3AQ16821 1122 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 AGKQ53H12 422 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 MTX3Q5HYI7 312 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 AGAP7PQ5VUJ5 663 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 ARHGAP36Q6ZRI8 547 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 GPRIN1Q7Z2K8 1008 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 HMGCLL1Q8TB92 370 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 ERLEC1Q96DZ1 483 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 OSBPL10Q9BXB5 764 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 TNFRSF12AQ9NP84 129 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 CCDC167Q9P0B6 97 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 CACNG4Q9UBN1 327 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 VPS51Q9UID3 782 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 FBXW11Q9UKB1 542 aa16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 PIN4Q9Y237 131 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-201ENST00000397901 CROCCQ5TZA2 2017 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 NRCAMQ92823 1304 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 TRPC5OSA6NMA1 111 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 MTSS1O43312 755 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 CLPXO76031 633 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 BCL10O95999 233 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 MT-CO1P00395 513 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 ZNF182P17025 639 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 SMPD1P17405 629 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 MYF6P23409 242 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 MAP4P27816 1152 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 TAS2R39P59534 338 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 LILRA4P59901 499 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 GRB14Q14449 540 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 KIAA0319Q5VV43 1072 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 WSCD1Q658N2 575 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 PPP4R4Q6NUP7 873 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 ZBTB49Q6ZSB9 765 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 VASH1Q7L8A9 365 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 KDELC2Q7Z4H8 507 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 HEXDCQ8WVB3 486 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 LPGAT1Q92604 370 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 NTAN1Q96AB6 310 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 CIB1Q99828 191 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 MRPL46Q9H2W6 279 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms