RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TSPAN11A1L157 253 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 PAPSS2O95340 614 aaPredicted RBP17■□□□□ 0.31
TSPAN4-205ENST00000397406 GSTA2P09210 222 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 NUDT17P0C025 328 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 PIRTP0C851 137 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 TGM1P22735 817 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 NTSR1P30989 418 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 WASP42768 502 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 CXCL12P48061 93 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 CCR3P51677 355 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 EPHB1P54762 984 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 SRSF5Q13243 272 aaKnown RBP17■□□□□ 0.31
TSPAN4-205ENST00000397406 C2orf27AQ580R0 203 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 CFAP58Q5T655 872 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 C3orf62Q6ZUJ4 267 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 IL17RCQ8NAC3 791 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 TMIEQ8NEW7 156 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 PPHLN1Q8NEY8 458 aaKnown RBP17■□□□□ 0.31
TSPAN4-205ENST00000397406 ZNF778Q96MU6 729 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 FCRL3Q96P31 734 aaPredicted RBP17■□□□□ 0.31
TSPAN4-205ENST00000397406 IER2Q9BTL4 223 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 VIPAS39Q9H9C1 493 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 VPS37BQ9H9H4 285 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 PPIL1Q9Y3C6 166 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 NFS1Q9Y697 457 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 DNAH14Q0VDD8 3507 aa17■□□□□ 0.31
TSPAN4-205ENST00000397406 A0A0J9YYE9 177 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 HEATR9A2RTY3 570 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 CHURC1-FNTBB4DL54 471 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 HRO43593 1189 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 LDB2O43679 373 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 SPAG6O75602 509 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 USP1O94782 785 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 TRBC1P01850 177 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 PRNPP04156 253 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 SHBGP04278 402 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 FNTBP49356 437 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 MRPS21P82921 87 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 CAMK2GQ13555 558 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 SEPT6Q14141 434 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 LRRC32Q14392 662 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 CRYMQ14894 314 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 PTPRRQ15256 657 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 FBXO43Q4G163 708 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 ANKRD20A4Q4UJ75 823 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 ZNF805Q5CZA5 627 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 CES3Q6UWW8 571 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 MDGA1Q8NFP4 955 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 UHMK1Q8TAS1 419 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 BRSK1Q8TDC3 778 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 BLOC1S5Q8TDH9 187 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 HCAR2Q8TDS4 363 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 ZNF669Q96BR6 464 aaPredicted RBP16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 MFSD3Q96ES6 412 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 ZIM3Q96PE6 472 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 DKK3Q9UBP4 350 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 SARDHQ9UL12 918 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 PPM1HQ9ULR3 514 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 PHTF1Q9UMS5 762 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 PLAAQ9Y263 795 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 RPS6KL1Q9Y6S9 549 aa16.99■□□□□ 0.31
TSPAN4-205ENST00000397406 A0A087WUV0 522 aaPredicted RBP16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 ZCWPW2A0A1B0GU75 182 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 MROH6A6NGR9 719 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 CAPN8A6NHC0 703 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 ADAM23O75077 832 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 KLF8O95600 359 aaPredicted RBP16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 C1QAP02745 245 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 POLBP06746 335 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 ALPIP09923 528 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 CTPS1P17812 591 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 NMBRP28336 390 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 PHBP35232 272 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 SPANXN3Q5MJ09 141 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 BRAT1Q6PJG6 821 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 TRMT11Q7Z4G4 463 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 KIAA2013Q8IYS2 634 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 OR2W6PQ8NHA6 318 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 GSDMBQ8TAX9 411 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 PIP4K2CQ8TBX8 421 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 MAGEE1Q9HCI5 957 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 TREX1Q9NSU2 369 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■■□ 22.7
TSPAN4-205ENST00000397406 HACD3Q9P035 362 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 RABGEF1Q9UJ41 708 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 SMG5Q9UPR3 1016 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 FAM169AQ9Y6X4 670 aa16.98■□□□□ 0.31
TSPAN4-205ENST00000397406 TCRBV9S1A1TA0A576 114 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 AURKAO14965 403 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 ATP8B1O43520 1251 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 RNF40O75150 1001 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 ABL2P42684 1182 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 FRG1Q14331 258 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 TAF1AQ15573 450 aaPredicted RBP16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 CDKN3Q16667 212 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 TSTD2Q5T7W7 516 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 ALS2CLQ60I27 953 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 CYS1Q717R9 158 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 GLT6D1Q7Z4J2 308 aa16.97■□□□□ 0.31
TSPAN4-205ENST00000397406 TTC30BQ8N4P2 665 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms