RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RBM15Q96T37 977 aaKnown RBP eCLIP8.82□□□□□ -1
CAPN3-208ENST00000397204 RAB6CQ9H0N0 254 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 SUV39H2Q9H5I1 410 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 NOL6Q9H6R4 1146 aaKnown RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 SYNDIG1Q9H7V2 258 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 STARD5Q9NSY2 213 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 KLQ9UEF7 1012 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 NOCTQ9UK39 431 aaKnown RBP8.82□□□□□ -1
CAPN3-208ENST00000397204 DAAM1Q9Y4D1 1078 aa8.82□□□□□ -1
CAPN3-208ENST00000397204 DOCK4Q8N1I0 1966 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 A0A1W2PQC6 194 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 TSPAN11A1L157 253 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 WASH4PA8MWX3 477 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 RASA4BC9J798 803 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 F8VZ95 297 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 MEN1O00255 615 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 PES1O00541 588 aaKnown RBP8.81□□□□□ -1
CAPN3-208ENST00000397204 INSIG1O15503 277 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 RASA4O43374 803 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 KELP23276 732 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 EPHB2P29323 1055 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CSNK1DP48730 415 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 LIG3P49916 1009 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 HDAC4P56524 1084 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 POLR2LP62875 67 aaKnown RBP8.81□□□□□ -1
CAPN3-208ENST00000397204 SERINC3Q13530 473 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 ARHGEF7Q14155 803 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CYTH1Q15438 398 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CT47A1Q5JQC4 288 aaPredicted RBP8.81□□□□□ -1
CAPN3-208ENST00000397204 LRRC73Q5JTD7 316 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CERCAMQ5T4B2 595 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 BRAT1Q6PJG6 821 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 WDR59Q6PJI9 974 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 ATG14Q6ZNE5 492 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 PRICKLE2Q7Z3G6 844 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 TAF8Q7Z7C8 310 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 DNAAF5Q86Y56 855 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CCNJLQ8IV13 435 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CCDC185Q8N715 623 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 Q8N9G6 341 aaPredicted RBP8.81□□□□□ -1
CAPN3-208ENST00000397204 JOSD2Q8TAC2 188 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CMKLR1Q99788 373 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 FOXP3Q9BZS1 431 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 KLC2Q9H0B6 622 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 CATSPERBQ9H7T0 1116 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 PCDH12Q9NPG4 1184 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 SIRPGQ9P1W8 387 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 LRIT1Q9P2V4 623 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 PISDQ9UG56 409 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 NEU3Q9UQ49 428 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 OR1A2Q9Y585 309 aa8.81□□□□□ -1
CAPN3-208ENST00000397204 FAM170AA1A519 330 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 SIGLEC16A6NMB1 481 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 CACNB4O00305 520 aaPredicted RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 PDE2AO00408 941 aaPredicted RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 ZW10O43264 779 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 NUDT21O43809 227 aaKnown RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 BUB1BO60566 1050 aaPredicted RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 UNGP13051 313 aaPredicted RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 CHRNB2P17787 502 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 ITGB6P18564 788 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 GPD1P21695 349 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 EEF1GP26641 437 aaKnown RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 CD82P27701 267 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 HTR7P34969 479 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 TRIM23P36406 574 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 AIF1P55008 147 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 UBE2HP62256 183 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 NSUN2Q08J23 767 aaKnown RBP eCLIP8.8□□□□□ -1
CAPN3-208ENST00000397204 CLPPQ16740 277 aaPredicted RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 EFHC2Q5JST6 749 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 MANEAQ5SRI9 462 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 CFAP58Q5T655 872 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 TMEM164Q5U3C3 297 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 SPRED1Q7Z699 444 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 PHLDB2Q86SQ0 1253 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 DTX1Q86Y01 620 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 OR56A4Q8NGH8 313 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 SLC30A5Q8TAD4 765 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 EXTL1Q92935 676 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 TUBGCP5Q96RT8 1024 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 NCAPGQ9BPX3 1015 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 ADAM22Q9P0K1 906 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 AKAP7Q9P0M2 348 aaPredicted RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 LHX3Q9UBR4 397 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 UBA2Q9UBT2 640 aaPredicted RBP8.8□□□□□ -1
CAPN3-208ENST00000397204 ATP8A1Q9Y2Q0 1164 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 COQ6Q9Y2Z9 468 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 LOXL2Q9Y4K0 774 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 NOTCH2Q04721 2471 aa8.8□□□□□ -1
CAPN3-208ENST00000397204 RP1L1Q8IWN7 2480 aaPredicted RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 ANKRD62A6NC57 917 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 TMEM202A6NGA9 273 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 PYCARD-AS1I3L0S3 204 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 FGF10O15520 208 aaPredicted RBP8.79□□□□□ -1
CAPN3-208ENST00000397204 SUV39H1O43463 412 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 B4GAT1O43505 415 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 CREB3O43889 395 aa8.79□□□□□ -1
CAPN3-208ENST00000397204 PRAMEF11O60813 436 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms