RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PGRMC1O00264 195 aaKnown RBP13.8□□□□□ -0.2
SEC13-205ENST00000397101 CST8O60676 142 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 PRNPP04156 253 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 CTSLP07711 333 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 SFTPCP11686 197 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 MYF5P13349 255 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 CHRNA3P32297 505 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 HTR7P34969 479 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 RABIFP47224 123 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 CLCN6P51797 869 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 CKAP4Q07065 602 aaKnown RBP13.8□□□□□ -0.2
SEC13-205ENST00000397101 EIF3IQ13347 325 aaKnown RBP13.8□□□□□ -0.2
SEC13-205ENST00000397101 FZD2Q14332 565 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 PPP2R5EQ16537 467 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 C5orf22Q49AR2 442 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 KIAA1161Q6NSJ0 714 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 ERN2Q76MJ5 926 aaKnown RBP13.8□□□□□ -0.2
SEC13-205ENST00000397101 EFL1Q7Z2Z2 1120 aaKnown RBP13.8□□□□□ -0.2
SEC13-205ENST00000397101 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
SEC13-205ENST00000397101 EXD3Q8N9H8 876 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 NAT6Q93015 286 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 TBATAQ96M53 351 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 MYOCQ99972 504 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 SEMA3CQ99985 751 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 ZYG11BQ9C0D3 744 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 FZD3Q9NPG1 666 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 DYRK4Q9NR20 520 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 RNF14Q9UBS8 474 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 CDC23Q9UJX2 597 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 ZFR2Q9UPR6 939 aaKnown RBP13.8□□□□□ -0.2
SEC13-205ENST00000397101 TBC1D30Q9Y2I9 924 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 PCDHGA7Q9Y5G6 932 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 NBPF19A0A087WUL8 3843 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 PTPN13Q12923 2485 aa13.8□□□□□ -0.2
SEC13-205ENST00000397101 CCDC187A0A096LP49 1063 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 GOLGA6L10A0A0M3HER8 536 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 FGF10O15520 208 aaPredicted RBP13.79□□□□□ -0.2
SEC13-205ENST00000397101 EFSO43281 561 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 CLDN11O75508 207 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 NEBLO76041 1014 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 NTRK1P04629 796 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 SRCP12931 536 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 ERCC2P18074 760 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 HCAR3P49019 387 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 CLDN2P57739 230 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 RPS21P63220 83 aaKnown RBP13.79□□□□□ -0.2
SEC13-205ENST00000397101 NRG1Q02297 640 aaPredicted RBP13.79□□□□□ -0.2
SEC13-205ENST00000397101 NFATC3Q12968 1075 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 NR0B2Q15466 257 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 CDKN3Q16667 212 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 WHAMMP3Q1A5X7 153 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 LINC00303Q3SY05 128 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 GUSBP11Q6P575 273 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 TMCO3Q6UWJ1 677 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 ATG14Q6ZNE5 492 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 CIR1Q86X95 450 aaPredicted RBP13.79□□□□□ -0.2
SEC13-205ENST00000397101 VSIG1Q86XK7 387 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 ZNF354CQ86Y25 554 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 OR2A12Q8NGT7 310 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 FAM71BQ8TC56 605 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 BTN2A2Q8WVV5 523 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 KLK6Q92876 244 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 HAUS1Q96CS2 278 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 LIN37Q96GY3 246 aaPredicted RBP13.79□□□□□ -0.2
SEC13-205ENST00000397101 PPP1R16AQ96I34 528 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 LENG8Q96PV6 779 aaPredicted RBP13.79□□□□□ -0.2
SEC13-205ENST00000397101 BOCQ9BWV1 1114 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 DONSONQ9NYP3 566 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 PPARGC1AQ9UBK2 798 aaKnown RBP13.79□□□□□ -0.2
SEC13-205ENST00000397101 VPS28Q9UK41 221 aa13.79□□□□□ -0.2
SEC13-205ENST00000397101 ZNF487B1APH4 448 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 KPNA3O00505 521 aaPredicted RBP13.78□□□□□ -0.2
SEC13-205ENST00000397101 KRIT1O00522 736 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 AQP9O43315 295 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 TNFSF15O95150 251 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 PCDH8O95206 1070 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 RHOQP17081 205 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 IL4RP24394 825 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 PTPN7P35236 360 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 RPIAP49247 311 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 CDH4P55283 916 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 ZNF574Q6ZN55 896 aaPredicted RBP13.78□□□□□ -0.2
SEC13-205ENST00000397101 PTAR1Q7Z6K3 402 aaPredicted RBP13.78□□□□□ -0.2
SEC13-205ENST00000397101 TFAP2DQ7Z6R9 452 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 LURAP1LQ8IV03 231 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 RASGEF1CQ8N431 466 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 OR52K2Q8NGK3 314 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 ASB12Q8WXK4 309 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 P3H4Q92791 437 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 GLMNQ92990 594 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 ARRDC3Q96B67 414 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 SGF29Q96ES7 293 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 AP1M1Q9BXS5 423 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 EFR3BQ9Y2G0 817 aa13.78□□□□□ -0.2
SEC13-205ENST00000397101 HEY1Q9Y5J3 304 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms