RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 LIPIQ6XZB0 460 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 ZNF438Q7Z4V0 828 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 SRLQ86TD4 932 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 C17orf82Q86X59 251 aaPredicted RBP17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 ZFAND4Q86XD8 727 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 CAMK1DQ8IU85 385 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 PAF1Q8N7H5 531 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 EXOC2Q96KP1 924 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 TAAR9Q96RI9 348 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 GSDMCQ9BYG8 508 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 TMEM168Q9H0V1 697 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 CDH19Q9H159 772 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 LRRC19Q9H756 370 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 CYP4F12Q9HCS2 524 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 TRNAU1APQ9NX07 287 aaKnown RBP17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 TUBD1Q9UJT1 453 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 FZD10Q9ULW2 581 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 UNC13CQ8NB66 2214 aa17.57■□□□□ 0.4
EXOSC3-202ENST00000396521 RHPN2P1A8MT19 583 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 B4DGG1 531 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 C9orf172C9J069 976 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 BUB1BO60566 1050 aaPredicted RBP17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 PALMO75781 387 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 JAM2P57087 298 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 TPI1P60174 286 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 POLR2FP61218 127 aaKnown RBP17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 ILF3Q12906 894 aaKnown RBP eCLIP17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 SQSTM1Q13501 440 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 TCEA2Q15560 299 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 TMCO4Q5TGY1 634 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 PNCKQ6P2M8 343 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 PHLDB2Q86SQ0 1253 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 PYROXD2Q8N2H3 581 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 PLA2G15Q8NCC3 412 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 ASPSCR1Q9BZE9 553 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 GANQ9H2C0 597 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 PHPT1Q9NRX4 125 aaPredicted RBP17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 FOXJ2Q9P0K8 574 aa17.56■□□□□ 0.4
EXOSC3-202ENST00000396521 FAM170AA1A519 330 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 PRSS38A1L453 326 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 MYCLP1P12525 358 aaPredicted RBP17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 CCNB1P14635 433 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 ETV5P41161 510 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 RENBPP51606 427 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 ZNF135P52742 658 aaPredicted RBP17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 AP1S1P61966 158 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 BIRC2Q13490 618 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 CLEC16AQ2KHT3 1053 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 PPP1R2P3Q6NXS1 205 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 DNAJC24Q6P3W2 148 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 BORAQ6PGQ7 559 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 DPPA4Q7L190 304 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 VASH2Q86V25 355 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 CATSPER2Q96P56 530 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 SEMA6CQ9H3T2 930 aa17.55■□□□□ 0.4
EXOSC3-202ENST00000396521 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 J3KR12 359 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 CCP110O43303 1012 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 B4GAT1O43505 415 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 NTRK1P04629 796 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 KRT10P13645 584 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 RALGDSQ12967 914 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 DPCR1Q3MIW9 517 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 HSP90AA4PQ58FG1 418 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 NETO2Q8NC67 525 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 AGBL5Q8NDL9 886 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 FUCA2Q9BTY2 467 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 DDA1Q9BW61 102 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 CINPQ9BW66 212 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 TRIM4Q9C037 500 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 MRPL40Q9NQ50 206 aaKnown RBP17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 FAM207AQ9NSI2 230 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 SAMSN1Q9NSI8 373 aaKnown RBP17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 MOSPD1Q9UJG1 213 aa17.54■□□□□ 0.4
EXOSC3-202ENST00000396521 CCDC172P0C7W6 258 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 TEAD1P28347 426 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 ALDH4A1P30038 563 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 PAPOLAP51003 745 aaKnown RBP17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 SRSF1Q07955 248 aaKnown RBP eCLIP17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 SRSF6Q13247 344 aaKnown RBP17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 C16orf72Q14CZ0 275 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 ACOX1Q15067 660 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 DCUN1D2Q6PH85 259 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 MON1BQ7L1V2 547 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 ZSWIM9Q86XI8 627 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 OR4D9Q8NGE8 314 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 ZDHHC1Q8WTX9 485 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 NKD1Q969G9 470 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 PSKH2Q96QS6 385 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 PCDHB18PQ96TA0 734 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 SLC12A9Q9BXP2 914 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 TEX101Q9BY14 249 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 CLSTN2Q9H4D0 955 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 CARS2Q9HA77 564 aaKnown RBP17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 SP110Q9HB58 689 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 RDH14Q9HBH5 336 aa17.53■□□□□ 0.4
EXOSC3-202ENST00000396521 IGHV5-10-1A0A0J9YXX1 117 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 TRAFD1O14545 582 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms