RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 TAS2R13Q9NYV9 303 aa11.6□□□□□ -0.55
PDXDC1-202ENST00000396410 PRPF19Q9UMS4 504 aaKnown RBP11.6□□□□□ -0.55
PDXDC1-202ENST00000396410 PSMD12O00232 456 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 ENPP3O14638 875 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 HOXB8P17481 243 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 LEPRP48357 1165 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 MRPS22P82650 360 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PLD1Q13393 1074 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PTPRCAPQ14761 206 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 LPCAT4Q643R3 524 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 GK5Q6ZS86 529 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PIM3Q86V86 326 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 NPAS4Q8IUM7 802 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 ST13P4Q8IZP2 240 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PDZD8Q8NEN9 1154 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 FBXO22Q8NEZ5 403 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 TUBGCP3Q96CW5 907 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 ADGRE3Q9BY15 652 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 SUFUQ9UMX1 484 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 DTNAQ9Y4J8 743 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 TRAF6Q9Y4K3 522 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 BNIP3LO60238 219 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 CACNG3O60359 315 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PAPSS2O95340 614 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 NDST3O95803 873 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 USP41Q3LFD5 358 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 BRSK1Q8TDC3 778 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 FEM1CQ96JP0 617 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 MAGEH1Q9H213 219 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 IL1RL2Q9HB29 575 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 TRMT6Q9UJA5 497 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 VPS28Q9UK41 221 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 A0A0D9SEW6 157 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PABPN1LA6NDY0 278 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 LIN7AO14910 233 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 VPS26AO75436 327 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 HSPA8P11142 646 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 COL6A1P12109 1028 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 RPS24P62847 133 aaKnown RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 CLEC6AQ6EIG7 209 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 ANO7Q6IWH7 933 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 BHLHE22Q8NFJ8 381 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 NRG4Q8WWG1 115 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PPP2R3CQ969Q6 453 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 RANBP9Q96S59 729 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 GPR63Q9BZJ6 419 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 PRDM5Q9NQX1 630 aaPredicted RBP11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 VPS9D1Q9Y2B5 631 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 SLC30A1Q9Y6M5 507 aa11.59□□□□□ -0.55
PDXDC1-202ENST00000396410 CCDC162PA2VCL2 907 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CCDC160A6NGH7 325 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 ANGPT2O15123 496 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 PRAMEF11O60813 436 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 ARNTP27540 789 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 ARSDP51689 593 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 SQLEQ14534 574 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 RTP2Q5QGT7 225 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 FBXO39Q8N4B4 442 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 OR4K2Q8NGD2 314 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 EFHD1Q9BUP0 239 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 NOL6Q9H6R4 1146 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CD274Q9NZQ7 290 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 AGO1Q9UL18 857 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 SORBS2O94875 1100 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CORO1AP31146 461 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CPOXP36551 454 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 ABL2P42684 1182 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CDH4P55283 916 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 RHOAP61586 193 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 ILF2Q12905 390 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 DLG1Q12959 904 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CDH18Q13634 790 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 HABP4Q5JVS0 413 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 RNF219Q5W0B1 726 aaPredicted RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 PCYOX1LQ8NBM8 494 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 OR6Y1Q8NGX8 325 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 TMEM169Q96HH4 297 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 BPIFA1Q9NP55 256 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 PKP3Q9Y446 797 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 COPG1Q9Y678 874 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 FAM155AB1AL88 458 aaPredicted RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CLDN11O75508 207 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CSPG5O95196 566 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 PAX7P23759 505 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 ADSLP30566 484 aaPredicted RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 TRIM71Q2Q1W2 868 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 TECRLQ5HYJ1 363 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 LRRC43Q8N309 656 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 UCMAQ8WVF2 138 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 MARCH4Q9P2E8 410 aaPredicted RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 CORO1CQ9ULV4 474 aaPredicted RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 GRID2O43424 1007 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 AFTPHQ6ULP2 937 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 HERC6Q8IVU3 1022 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 TRPC4APQ8TEL6 797 aa11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 C2orf15Q8WU43 125 aaKnown RBP11.58□□□□□ -0.56
PDXDC1-202ENST00000396410 TRMOQ9BU70 441 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms