RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 EFL1Q7Z2Z2 1120 aaKnown RBP13.79□□□□□ -0.2
CXCL12-205ENST00000395794 GKN2Q86XP6 184 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 SDR16C5Q8N3Y7 309 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TEX26Q8N6G2 289 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 DCBLD1Q8N8Z6 715 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 CCNYQ8ND76 341 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TPCN2Q8NHX9 752 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-205ENST00000395794 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 NAT6Q93015 286 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-205ENST00000395794 DEPDC7Q96QD5 511 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 CHP1Q99653 195 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 SEMA3CQ99985 751 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 LRRC61Q9BV99 259 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TRIM5Q9C035 493 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 TCEAL2Q9H3H9 227 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-205ENST00000395794 SPTLC3Q9NUV7 552 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 RAXQ9Y2V3 346 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 DOCK9Q9BZ29 2069 aa13.79□□□□□ -0.2
CXCL12-205ENST00000395794 LRRD1A4D1F6 860 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 MATN3O15232 486 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 PGLSO95336 258 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 EPHB1P54762 984 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 KIAA1024LP59773 190 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 TRAF2Q12933 501 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 ALG11Q2TAA5 492 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 C6orf132Q5T0Z8 1188 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 FATE1Q969F0 183 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 NUS1Q96E22 293 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 SCRN2Q96FV2 425 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 TSGA13Q96PP4 275 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 BOCQ9BWV1 1114 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 WDR26Q9H7D7 661 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 RBM22Q9NW64 420 aaKnown RBP eCLIP13.78□□□□□ -0.2
CXCL12-205ENST00000395794 GULP1Q9UBP9 304 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 AMACRQ9UHK6 382 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 RAI2Q9Y5P3 530 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 SPEGQ15772 3267 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 IGF2RP11717 2491 aa13.78□□□□□ -0.2
CXCL12-205ENST00000395794 EME2A4GXA9 379 aaPredicted RBP13.77□□□□□ -0.21
CXCL12-205ENST00000395794 GOLGA6CA6NDK9 693 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 GOLGA6BA6NDN3 693 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 HEXIM1O94992 359 aaKnown RBP13.77□□□□□ -0.21
CXCL12-205ENST00000395794 MAP3K6O95382 1288 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 HOXC4P09017 264 aaPredicted RBP13.77□□□□□ -0.21
CXCL12-205ENST00000395794 GOLGA6DP0CG33 693 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 CCNB1P14635 433 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 PTPRBP23467 1997 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 KDELR1P24390 212 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 RTP5Q14D33 572 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 PNCKQ6P2M8 343 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 GUSBP11Q6P575 273 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 CPNE8Q86YQ8 564 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.77□□□□□ -0.21
CXCL12-205ENST00000395794 PLA2G15Q8NCC3 412 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 MAML1Q92585 1016 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 FUBP1Q96AE4 644 aaKnown RBP13.77□□□□□ -0.21
CXCL12-205ENST00000395794 FAF2Q96CS3 445 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 COQ10AQ96MF6 247 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 NSMCE3Q96MG7 304 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 RNF157Q96PX1 679 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 CLPBQ9H078 707 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 PHPT1Q9NRX4 125 aaPredicted RBP13.77□□□□□ -0.21
CXCL12-205ENST00000395794 GOLGA6AQ9NYA3 693 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 MOSPD1Q9UJG1 213 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 INTUQ9ULD6 942 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 PADI4Q9UM07 663 aa13.77□□□□□ -0.21
CXCL12-205ENST00000395794 LY6G6EA0A0G2JKS1 128 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 PSMD11O00231 422 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 TNFRSF10CO14798 259 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 ZFXP17010 805 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-205ENST00000395794 CTPS1P17812 591 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 TRIM23P36406 574 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 SLC1A1P43005 524 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 GBE1Q04446 702 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 TCEA2Q15560 299 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 CNGA3Q16281 694 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 TAF8Q7Z7C8 310 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 RHOT1Q8IXI2 618 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 CCDC13Q8IYE1 715 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 PQLC3Q8N755 202 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 WDR48Q8TAF3 677 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 RAPGEF5Q92565 580 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 LUC7LQ9NQ29 371 aaKnown RBP13.76□□□□□ -0.21
CXCL12-205ENST00000395794 DDX56Q9NY93 547 aaKnown RBP13.76□□□□□ -0.21
CXCL12-205ENST00000395794 SIRPGQ9P1W8 387 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 DNPEPQ9ULA0 475 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 PNMA8BQ9ULN7 279 aaPredicted RBP13.76□□□□□ -0.21
CXCL12-205ENST00000395794 GPR34Q9UPC5 381 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 HEY1Q9Y5J3 304 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 DGKBQ9Y6T7 804 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 U3KQA8 63 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 PLXNB3Q9ULL4 1909 aa13.76□□□□□ -0.21
CXCL12-205ENST00000395794 TMEM202A6NGA9 273 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 NPIPB15A6NHN6 443 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms