RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 C16orf70Q9BSU1 422 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 APOL5Q9BWW9 433 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 MUC3BQ9H195 1237 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 ZCWPW2A0A1B0GU75 182 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 A8MT66 165 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SPTLC1O15269 473 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CELF2O95319 508 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 BCL10O95999 233 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 LINC00032P0C843 101 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CDH2P19022 906 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 RHDQ02161 417 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 TNK2Q07912 1038 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 RFTN1Q14699 578 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SGO1Q5FBB7 561 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 ACBD5Q5T8D3 534 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 PAOXQ6QHF9 649 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 LDB1Q86U70 411 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CBR4Q8N4T8 237 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 METTL6Q8TCB7 284 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 KBTBD7Q8WVZ9 684 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 MLPHQ9BV36 600 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 TRIM54Q9BYV2 358 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CD3EAPO15446 510 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 KPNA6O60684 536 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC11A2P49281 568 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CXCR3P49682 368 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF33AQ06730 810 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 HNRNPDQ14103 355 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 PGM2L1Q6PCE3 622 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SPPL2CQ8IUH8 684 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 NKAPQ8N5F7 415 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 TWIST2Q8WVJ9 160 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 MOCOSQ96EN8 888 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 OSBPL2Q9H1P3 480 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 C8orf4Q9NR00 106 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 OLA1Q9NTK5 396 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 WWOXQ9NZC7 414 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CEP350Q5VT06 3117 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 HMX2A2RU54 273 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 E9PAM4 449 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 M0R3G1 203 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC7A4O43246 635 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 FGF1P05230 155 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC35E2BP0CK96 405 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 HLA-DPA1P20036 260 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 VPS26BQ4G0F5 336 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 RAP1GAP2Q684P5 730 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 GLT6D1Q7Z4J2 308 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 RTL3Q8N8U3 475 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 ITFG1Q8TB96 612 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 MTG1Q9BT17 334 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 AFF4Q9UHB7 1163 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 PCDHB5Q9Y5E4 795 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 FADS3Q9Y5Q0 445 aa11.69□□□□□ -0.54
UBE2D3-209ENST00000394804 DENRO43583 198 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 BNIP3LO60238 219 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 DNAJA2O60884 412 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 MLYCDO95822 493 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 PIRTP0C851 137 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ALOX15P16050 662 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 GLDCP23378 1020 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 GALK1P51570 392 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 NAA20P61599 178 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 GPSM1Q86YR5 675 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 CENPLQ8N0S6 344 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 TXNDC5Q8NBS9 432 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF778Q96MU6 729 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SMOQ99835 787 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SH3GL1Q99961 368 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 TLR8Q9NR97 1041 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 MARCH2Q9P0N8 246 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC2A6Q9UGQ3 507 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 NUMBLQ9Y6R0 609 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SDHDO14521 159 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 IRAK2O43187 625 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 HLA-DQB2P05538 268 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 CKMT2P17540 419 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 C21orf59P57076 290 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ATP6V0D1P61421 351 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 LSAMPQ13449 338 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 PITRM1Q5JRX3 1037 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 TBC1D21Q8IYX1 336 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 LPCAT1Q8NF37 534 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 CCL22O00626 93 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 BEST1O76090 585 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 YWHAQP27348 245 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SCAPQ12770 1279 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 PRKG2Q13237 762 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF177Q13360 481 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 PIGGQ5H8A4 983 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ZDHHC13Q8IUH4 622 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms