RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MFSD1Q9H3U5 465 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 TMEM9Q9P0T7 183 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 DSEQ9UL01 958 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 A0A0J9YYE9 177 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 RNF103-CHMP3A0A140T963 221 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 ZNF839A8K0R7 811 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 WASH4PA8MWX3 477 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 HHLA1C9JL84 531 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 PMPCBO75439 489 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 SNAI1O95863 264 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 IGLV3-25P01717 112 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 LBPP18428 481 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 MRPL19P49406 292 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 PRAMEP78395 509 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 RALGDSQ12967 914 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 ABRAXAS1Q6UWZ7 409 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 CYP2R1Q6VVX0 501 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 SPATA19Q7Z5L4 167 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 ARHGAP12Q8IWW6 846 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 RBM12BQ8IXT5 1001 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 ZMIZ2Q8NF64 920 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 RHEBL1Q8TAI7 183 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 EDEM1Q92611 657 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 MRGPRX2Q96LB1 330 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 TUBA1CQ9BQE3 449 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 GPATCH1Q9BRR8 931 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 ADI1Q9BV57 179 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 CCDC68Q9H2F9 335 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 HIPK3Q9H422 1215 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 TBC1D23Q9NUY8 699 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 PKD2L2Q9NZM6 624 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 CDH7Q9ULB5 785 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 PCDHGB5Q9Y5G0 923 aa10.07□□□□□ -0.8
UBE2D3-208ENST00000394803 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SH3PXD2BA1X283 911 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 ADM5C9JUS6 153 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 I6L893 689 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 M0QZ92 97 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 CBFA2T3O75081 653 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 TIPRLO75663 272 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 NPPAP01160 153 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 HLA-DQB2P05538 268 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 PYGLP06737 847 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 THP07101 528 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 F7P08709 466 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SLC2A3P11169 496 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 GPX3P22352 226 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 NDST2P52849 883 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 WNT3AP56704 352 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 PLOD1Q02809 727 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 MERTKQ12866 999 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 TMED1Q13445 227 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 MFSD10Q14728 455 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 GEN1Q17RS7 908 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 ACBD5Q5T8D3 534 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 HMBOX1Q6NT76 420 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 PRR23BQ6ZRT6 265 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 FKBP9P1Q75LS8 142 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 ZNF554Q86TJ5 538 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 CILP2Q8IUL8 1156 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 TBC1D21Q8IYX1 336 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 ZNF786Q8N393 782 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 BBS5Q8N3I7 341 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 RTL3Q8N8U3 475 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 HMGCLL1Q8TB92 370 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 FNDC8Q8TC99 324 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 CANT1Q8WVQ1 401 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 DNAJB3Q8WWF6 145 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 MOCOSQ96EN8 888 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 ACBD6Q9BR61 282 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 TINF2Q9BSI4 451 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SYT17Q9BSW7 474 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SLC39A8Q9C0K1 460 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 RNF39Q9H2S5 420 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SMOC2Q9H3U7 446 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 ACSS2Q9NR19 701 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 AGPAT4Q9NRZ5 378 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 MYBPHLA2RUH7 354 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 GRXCR2A6NFK2 248 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 TRIM64A6NGJ6 449 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 PTGESO14684 152 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 AZIN1O14977 448 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 RASAL1O95294 804 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 CD1EP15812 388 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 FGFR3P22607 806 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 FSCN1Q16658 493 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 MANEALQ5VSG8 457 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 AFMIDQ63HM1 303 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 MRNIPQ6NTE8 343 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 BHLHA9Q7RTU4 235 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 GPRIN1Q7Z2K8 1008 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 CLVS1Q8IUQ0 354 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SPATA6LQ8N4H0 392 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 TRPV3Q8NET8 790 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 PHF21BQ96EK2 531 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms