RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TMEM175Q9BSA9 504 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 MECRQ9BV79 373 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 ZYG11BQ9C0D3 744 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 IRF2BPLQ9H1B7 796 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 UBP1Q9NZI7 540 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 V9GYQ6 96 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 YJEFN3A6XGL0 299 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 EVPLLA8MZ36 301 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 BHMG1C9JSJ3 638 aaPredicted RBP5.71□□□□□ -1.49
RFFL-202ENST00000394597 GSTA4O15217 222 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 TLR5O60602 858 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 TSPAN3O60637 253 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 SRP72O76094 671 aaKnown RBP5.71□□□□□ -1.49
RFFL-202ENST00000394597 TGDSO95455 350 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 SEC24AO95486 1093 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 CD48P09326 243 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 SPATA31D3P0C874 917 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 T-ENOLP0DO92 83 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 COX4I1P13073 169 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 GRK2P25098 689 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 PSMA4P25789 261 aaKnown RBP5.71□□□□□ -1.49
RFFL-202ENST00000394597 SLC1A6P48664 564 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 CDH17Q12864 832 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 STX5Q13190 355 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 PPIGQ13427 754 aaKnown RBP eCLIP5.71□□□□□ -1.499e-12■■■■□ 24.8
RFFL-202ENST00000394597 USP10Q14694 798 aaKnown RBP5.71□□□□□ -1.49
RFFL-202ENST00000394597 UPP1Q16831 310 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 PAGE2BQ5JRK9 111 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 SH3PXD2AQ5TCZ1 1133 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 RAP1GAP2Q684P5 730 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 DRICH1Q6PGQ1 229 aaPredicted RBP5.71□□□□□ -1.49
RFFL-202ENST00000394597 SPATA31D4Q6ZUB0 917 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 OTOP2Q7RTS6 562 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 BNIPLQ7Z465 357 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 SYTL1Q8IYJ3 562 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 GALNT6Q8NCL4 622 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 OR7A2PQ8NGA2 310 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 C2orf15Q8WU43 125 aaKnown RBP5.71□□□□□ -1.49
RFFL-202ENST00000394597 FICDQ9BVA6 458 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 TPK1Q9H3S4 243 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 IL1RL2Q9HB29 575 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 TCF7L2Q9NQB0 619 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.71□□□□□ -1.49
RFFL-202ENST00000394597 MIOSQ9NXC5 875 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 TBC1D14Q9P2M4 693 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 DGKBQ9Y6T7 804 aa5.71□□□□□ -1.49
RFFL-202ENST00000394597 PAPPA2Q9BXP8 1791 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 ABHD14A-ACY1A0A1B0GW23 586 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 A0A1W2PPW3 197 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 UBA6A0AVT1 1052 aaPredicted RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 ERI2A8K979 691 aaKnown RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 TRDMT1O14717 391 aaKnown RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 HCRTO43612 131 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 GUCY1B2O75343 617 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 PAGE1O75459 146 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 ADH1AP07327 375 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 RALBP11234 206 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 LSM3P62310 102 aaKnown RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 HTRA3P83110 453 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 OGDHQ02218 1023 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 TWF1Q12792 350 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 ZFP69Q49AA0 526 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 DCAF12L1Q5VU92 463 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 GATAD2AQ86YP4 633 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 CAMK1DQ8IU85 385 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 EFHBQ8N7U6 833 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 BPIFB6Q8NFQ5 453 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 ATP6V1E2Q96A05 226 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 TUBGCP3Q96CW5 907 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 TSPAN17Q96FV3 270 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 LGMNQ99538 433 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 CIB1Q99828 191 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 BBS2Q9BXC9 721 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 C6orf62Q9GZU0 229 aaPredicted RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 IARS2Q9NSE4 1012 aaKnown RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 GMIPQ9P107 970 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 VPS28Q9UK41 221 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 PLA2G4CQ9UP65 541 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 CDYLQ9Y232 598 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 BCLAF3A2AJT9 711 aaKnown RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 TMEM114B3SHH9 223 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 CBX4O00257 560 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 PTGESO14684 152 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 AREL1O15033 823 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 ADAMTS4O75173 837 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 XYLBO75191 536 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 HDCP19113 662 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 HOXD11P31277 338 aaPredicted RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 SEPHS1P49903 392 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 SERPINH1P50454 418 aaKnown RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 RABGGTBP53611 331 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 CCDC85BQ15834 202 aaPredicted RBP5.71□□□□□ -1.5
RFFL-202ENST00000394597 OR8H2Q8N162 312 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 CCDC185Q8N715 623 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 LINC01465Q8N7H1 131 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 FBXO22Q8NEZ5 403 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 KLHL32Q96NJ5 620 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 SYT11Q9BT88 431 aa5.71□□□□□ -1.5
RFFL-202ENST00000394597 HTATIP2Q9BUP3 242 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms