RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 CCDC167Q9P0B6 97 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 PCDHA3Q9Y5H8 950 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 LAMC3Q9Y6N6 1575 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 KRBOX1C9JBD0 128 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 NPY2RP49146 381 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 VEGFCP49767 419 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 PCSK9Q8NBP7 692 aaKnown RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 LPCAT1Q8NF37 534 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 TPD52L3Q96J77 140 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 KLF6Q99612 283 aaPredicted RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 ANKRA2Q9H9E1 313 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 CKLFQ9UBR5 152 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 MAN2B2Q9Y2E5 1009 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 PCDHGC5Q9Y5F6 944 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 IGSF9BQ9UPX0 1349 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 ABCA8O94911 1581 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 NPHP3-ACAD11A0A0J9YXS1 232 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 GNG14A0A1W2PPG7 69 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 ZW10O43264 779 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 BBOX1O75936 387 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 DNAJB5O75953 348 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 UQCRC1P31930 480 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 HIPK1Q86Z02 1210 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 ZNF431Q8TF32 576 aaPredicted RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 KCNS3Q9BQ31 491 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 BCL2L14Q9BZR8 327 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 MTMR12Q9C0I1 747 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 CRISPLD1Q9H336 500 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 WDR26Q9H7D7 661 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 PALLDQ8WX93 1383 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 ANKDD1BA6NHY2 528 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 MEN1O00255 615 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 PLIN3O60664 434 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 HNF1AP20823 631 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 FXR2P51116 673 aaKnown RBP eCLIP9.08□□□□□ -0.966e-8■■■□□ 16
CHD2-201ENST00000394196 RANP62826 216 aaKnown RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 TMPRSS11AQ6ZMR5 421 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 ZCCHC9Q8N567 271 aaKnown RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 RTKNQ9BST9 563 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 SENP6Q9GZR1 1112 aaPredicted RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 CRLS1Q9UJA2 301 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 CROCC2H7BZ55 1655 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 CACNA1FO60840 1977 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 IFNA1P01562 189 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 A1BGP04217 495 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 VAMP1P23763 118 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 SLC5A3P53794 718 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 RBM43Q6ZSC3 357 aaKnown RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 PTAR1Q7Z6K3 402 aaPredicted RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 PDZD9Q8IXQ8 264 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 GJD3Q8N144 294 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 NSUN6Q8TEA1 469 aaKnown RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 KIF12Q96FN5 646 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 ADAM28Q9UKQ2 775 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 H3BRB1 525 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 MZF1P28698 734 aaPredicted RBP9.08□□□□□ -0.96
CHD2-201ENST00000394196 VPS26BQ4G0F5 336 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 SAPCD2Q86UD0 394 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 TSPAN33Q86UF1 283 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 CEP76Q8TAP6 659 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 BIRC8Q96P09 236 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 OPA3Q9H6K4 179 aa9.08□□□□□ -0.96
CHD2-201ENST00000394196 C12orf71A8MTZ7 269 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 RPLP0P05388 317 aaKnown RBP9.07□□□□□ -0.96
CHD2-201ENST00000394196 CLEC3BP05452 202 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 TEAD4Q15561 434 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 EZH2Q15910 746 aaKnown RBP9.07□□□□□ -0.96
CHD2-201ENST00000394196 SV2CQ496J9 727 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 DCST2Q5T1A1 773 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD2-201ENST00000394196 SLC25A41Q8N5S1 370 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 C11orf24Q96F05 449 aaPredicted RBP9.07□□□□□ -0.96
CHD2-201ENST00000394196 LPIN3Q9BQK8 851 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 CHST12Q9NRB3 414 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 EIF2B4Q9UI10 523 aaKnown RBP9.07□□□□□ -0.96
CHD2-201ENST00000394196 ZNF639Q9UID6 485 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 NCKAP1Q9Y2A7 1128 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 PCDHA10Q9Y5I2 948 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 MYH7P12883 1935 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 MLYCDO95822 493 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 GLP2RO95838 553 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 SYT16Q17RD7 645 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 C16orf58Q96GQ5 468 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 CAPN10Q9HC96 672 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 HOXC10Q9NYD6 342 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 MID1O15344 667 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 MAFKO60675 156 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 PAHP00439 452 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 FCER1AP12319 257 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 RAB3BP20337 219 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 FBLN1P23142 703 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 DSG3P32926 999 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 UGT1A5P35504 534 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 UGT2B15P54855 530 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 CYP24A1Q07973 514 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 ALG11Q2TAA5 492 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 GLRA4Q5JXX5 417 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 SLC30A10Q6XR72 485 aa9.07□□□□□ -0.96
CHD2-201ENST00000394196 POLR3FQ9H1D9 316 aaPredicted RBP9.07□□□□□ -0.96
CHD2-201ENST00000394196 MAGEL2Q9UJ55 1249 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms