RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 DAPK3O43293 454 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 NOBOXO60393 691 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 TNFAIP3P21580 790 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 SLC5A2P31639 672 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 HSPA9P38646 679 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 HLTFQ14527 1009 aaKnown RBP eCLIP17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 CLPPQ16740 277 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 CA9Q16790 459 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 C14orf28Q4W4Y0 310 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 CYP4V2Q6ZWL3 525 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 CCNJLQ8IV13 435 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 SYNDIG1Q9H7V2 258 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 EPB41L5Q9HCM4 733 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 FGF22Q9HCT0 170 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 TAS2R14Q9NYV8 317 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 SEPT3Q9UH03 358 aa17.55■□□□□ 0.4
SNRPA1-202ENST00000394082 HTRA2O43464 458 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 PRPSAP2O60256 369 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 SOCS5O75159 536 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 GM2AP17900 193 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 NFKBIAP25963 317 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 KCTD16Q68DU8 428 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 PNCKQ6P2M8 343 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 SPRED1Q7Z699 444 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 TAF8Q7Z7C8 310 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 C17orf82Q86X59 251 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 CBARPQ8N350 705 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 NPWQ8N729 165 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 FAM46DQ8NEK8 389 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 KIAA1524Q8TCG1 905 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 PEBP4Q96S96 227 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 KCTD15Q96SI1 283 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 SEMA4CQ9C0C4 833 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 WDR26Q9H7D7 661 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 GPATCH2LQ9NWQ4 482 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 ANKRD36A6QL64 1941 aa17.54■□□□□ 0.4
SNRPA1-202ENST00000394082 EFSO43281 561 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 JMJD7P0C870 316 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 LIPCP11150 499 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 TEAD1P28347 426 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 MIPP30301 263 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 PCK1P35558 622 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 SCNN1BP51168 640 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 DPYSQ14117 519 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 LBRQ14739 615 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 NR1D2Q14995 579 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 RALGPS1Q5JS13 557 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 GPBAR1Q8TDU6 330 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 COQ10AQ96MF6 247 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 CMKLR1Q99788 373 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 TEX101Q9BY14 249 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 FOXP3Q9BZS1 431 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 TMEM168Q9H0V1 697 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 ZWILCHQ9H900 591 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 AIPL1Q9NZN9 384 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 LRIT1Q9P2V4 623 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 PCSK1NQ9UHG2 260 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 PIEZO2Q9H5I5 2752 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 SCN8AQ9UQD0 1980 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 BOD1L1Q8NFC6 3051 aa17.53■□□□□ 0.4
SNRPA1-202ENST00000394082 AHCTF1Q8WYP5 2266 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 UNC13CQ8NB66 2214 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 PRSS38A1L453 326 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 PSMD11O00231 422 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 DFFAO00273 331 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 ZW10O43264 779 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 LRCH4O75427 683 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 ITGB2P05107 769 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 PRKCGP05129 697 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 MYCLP1P12525 358 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 CR2P20023 1033 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 CD82P27701 267 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 PRKCIP41743 596 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 PEX6Q13608 980 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 ARHGEF7Q14155 803 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 LY6DQ14210 128 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 DPYSL2Q16555 572 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 ZSCAN23Q3MJ62 389 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 SPECC1LQ69YQ0 1117 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 NYAP1Q6ZVC0 841 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 ZNF438Q7Z4V0 828 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 SLITRK4Q8IW52 837 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 LGR4Q9BXB1 951 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 DPEP2Q9H4A9 486 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 MRPL47Q9HD33 250 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 TRNAU1APQ9NX07 287 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 CWC15Q9P013 229 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 LOXL2Q9Y4K0 774 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 SCINQ9Y6U3 715 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 RNF215Q9Y6U7 377 aa17.52■□□□□ 0.4
SNRPA1-202ENST00000394082 PEX11BO96011 259 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 FTLP02792 175 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 MYBL1P10243 752 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 CCNB1P14635 433 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 B4GALNT1Q00973 533 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 SLC10A7Q0GE19 358 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 BOLA3Q53S33 107 aa17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 PPP6R3Q5H9R7 873 aaPredicted RBP17.51■□□□□ 0.39
SNRPA1-202ENST00000394082 KIAA1614Q5VZ46 1190 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms