RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 PAPSS2O95340 614 aaPredicted RBP24.33■■□□□ 1.49
LRFN4-202ENST00000393952 XPAP23025 273 aaPredicted RBP24.33■■□□□ 1.49
LRFN4-202ENST00000393952 ZNF140P52738 457 aaPredicted RBP24.33■■□□□ 1.49
LRFN4-202ENST00000393952 COPAP53621 1224 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 CST6Q15828 149 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 CNGA3Q16281 694 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 CDKN3Q16667 212 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 HSF5Q4G112 596 aaPredicted RBP24.33■■□□□ 1.49
LRFN4-202ENST00000393952 EOGTQ5NDL2 527 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 FAM46CQ5VWP2 391 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 TTC7BQ86TV6 843 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 TSPAN33Q86UF1 283 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 OR13J1Q8NGT2 312 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 PPP1R16AQ96I34 528 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 NECAB3Q96P71 396 aaPredicted RBP24.33■■□□□ 1.49
LRFN4-202ENST00000393952 LYSMD1Q96S90 227 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 GPR63Q9BZJ6 419 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 FOXQ1Q9C009 403 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 VIPAS39Q9H9C1 493 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 LMAN1LQ9HAT1 526 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 CD248Q9HCU0 757 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 PCDH12Q9NPG4 1184 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 IL1RAPL1Q9NZN1 696 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 B4GALT6Q9UBX8 382 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 MMP17Q9ULZ9 603 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 C1orf232A0A0U1RR37 186 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 CCL22O00626 93 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 PIAS1O75925 651 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 ALDH1A2O94788 518 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 C1QAP02745 245 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 STX2P32856 288 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 FAM193AP78312 1265 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 EFTUD2Q15029 972 aaKnown RBP eCLIP24.33■■□□□ 1.48
LRFN4-202ENST00000393952 ALS2CLQ60I27 953 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 CRTC1Q6UUV9 634 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 MICALCLQ6ZW33 695 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 OR13C4Q8NGS5 318 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 DNAJC1Q96KC8 554 aaKnown RBP24.33■■□□□ 1.48
LRFN4-202ENST00000393952 SRPK1Q96SB4 655 aaKnown RBP24.33■■□□□ 1.48
LRFN4-202ENST00000393952 ACSS3Q9H6R3 686 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 MOCS1Q9NZB8 636 aa24.33■■□□□ 1.48
LRFN4-202ENST00000393952 C2orf81A6NN90 581 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 MID1O15344 667 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 LPOP22079 712 aaPredicted RBP24.32■■□□□ 1.48
LRFN4-202ENST00000393952 LHCGRP22888 699 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 RPS14P62263 151 aaKnown RBP24.32■■□□□ 1.48
LRFN4-202ENST00000393952 TMPRSS15P98073 1019 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 LRRC32Q14392 662 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 ZNF776Q68DI1 518 aaPredicted RBP24.32■■□□□ 1.48
LRFN4-202ENST00000393952 OR4K2Q8NGD2 314 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 STYXQ8WUJ0 223 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 EID2BQ96D98 161 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 CERS2Q96G23 380 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 MKRN2Q9H000 416 aaKnown RBP24.32■■□□□ 1.48
LRFN4-202ENST00000393952 SLC6A17Q9H1V8 727 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 FBRSQ9HAH7 460 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 DYRK4Q9NR20 520 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 SMYD2Q9NRG4 433 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 RIMKLBQ9ULI2 386 aa24.32■■□□□ 1.48
LRFN4-202ENST00000393952 FAM170BA6NMN3 283 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 CLDN7O95471 211 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 ADH1BP00325 375 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 ARSDP51689 593 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 IFFO1Q0D2I5 559 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 FZD5Q13467 585 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 FRG1Q14331 258 aaKnown RBP24.31■■□□□ 1.48
LRFN4-202ENST00000393952 LONRF1Q17RB8 773 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 KIAA0930Q6ICG6 404 aaPredicted RBP24.31■■□□□ 1.48
LRFN4-202ENST00000393952 LRIG3Q6UXM1 1119 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 TMEM92Q6UXU6 159 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 ERN2Q76MJ5 926 aaKnown RBP24.31■■□□□ 1.48
LRFN4-202ENST00000393952 TBC1D17Q9HA65 648 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 ZFYVE1Q9HBF4 777 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 SCN8AQ9UQD0 1980 aa24.31■■□□□ 1.48
LRFN4-202ENST00000393952 VAPBO95292 243 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 ERVK-10P10266 1014 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 ARNTP27540 789 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 VIPR1P32241 457 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 ACVR1Q04771 509 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 ZNF844Q08AG5 666 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 CNTN1Q12860 1018 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 STAT4Q14765 748 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 SKIDA1Q1XH10 827 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 KBTBD12Q3ZCT8 623 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 LRRC66Q68CR7 880 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 FBXL19Q6PCT2 694 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 SYNPOQ8N3V7 929 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 PEX13Q92968 403 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 CYTH2Q99418 400 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 HDAC8Q9BY41 377 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 BPIFA1Q9NP55 256 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 PPANQ9NQ55 473 aaKnown RBP24.3■■□□□ 1.48
LRFN4-202ENST00000393952 C20orf96Q9NUD7 363 aaPredicted RBP24.3■■□□□ 1.48
LRFN4-202ENST00000393952 NLE1Q9NVX2 485 aaPredicted RBP24.3■■□□□ 1.48
LRFN4-202ENST00000393952 ITM2BQ9Y287 266 aa24.3■■□□□ 1.48
LRFN4-202ENST00000393952 EXOC1LA0A1B0GW35 172 aa24.29■■□□□ 1.48
LRFN4-202ENST00000393952 FAM159BA6NKW6 160 aa24.29■■□□□ 1.48
LRFN4-202ENST00000393952 CXorf49A8MYA2 514 aaPredicted RBP24.29■■□□□ 1.48
LRFN4-202ENST00000393952 STX7O15400 261 aaKnown RBP24.29■■□□□ 1.48
LRFN4-202ENST00000393952 SPINT1O43278 529 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms