RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 FAM126BQ8IXS8 530 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 ELMOD1Q8N336 334 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 TMEM132CQ8N3T6 1108 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 MREGQ8N565 214 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 TSEN2Q8NCE0 465 aaKnown RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 DAGLBQ8NCG7 672 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 TMIEQ8NEW7 156 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 OR52J3Q8NH60 311 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 CPT1CQ8TCG5 803 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 LRTOMTQ8WZ04 291 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 RFKQ969G6 155 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 TMEM203Q969S6 136 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 DNAJA3Q96EY1 480 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 Q96MT0 163 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 ALPK1Q96QP1 1244 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 OR5B12Q96R08 314 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 GPR63Q9BZJ6 419 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 POLR3FQ9H1D9 316 aaPredicted RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 ARL8BQ9NVJ2 186 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 GMEB2Q9UKD1 530 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 TBC1D30Q9Y2I9 924 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 PCDHGA8Q9Y5G5 932 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 IFT140Q96RY7 1462 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 DENND3A2RUS2 1198 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 ISM1B1AKI9 464 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 CLDN25C9JDP6 229 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 PIP5K1BO14986 540 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 RGS14O43566 566 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 VAMP4O75379 141 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 SCGB2A1O75556 95 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 IFNA17P01571 189 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 HOXD12P35452 270 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 RAB7AP51149 207 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 AP3S2P59780 193 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 IL2P60568 153 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 BDH1Q02338 343 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 ATPAF1Q5TC12 328 aaPredicted RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 GPR157Q5UAW9 335 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 AGAP9Q5VTM2 703 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 BTBD8Q5XKL5 378 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 ARHGAP11AQ6P4F7 1023 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 BRINP3Q76B58 766 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 CYP2U1Q7Z449 544 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 P2RY8Q86VZ1 359 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 ERI1Q8IV48 349 aaKnown RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 MMGT1Q8N4V1 131 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 OR52L1Q8NGH7 329 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 LRRN4Q8WUT4 740 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 RCN3Q96D15 328 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 SLC41A3Q96GZ6 507 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 SPACA7Q96KW9 195 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 SNX27Q96L92 541 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 ZNF512Q96ME7 567 aaPredicted RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 RNF157Q96PX1 679 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 GAD1Q99259 594 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 RTFDC1Q9BY42 306 aaPredicted RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 PPA2Q9H2U2 334 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 STN1Q9H668 368 aaKnown RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 ERVK-5Q9HDB9 667 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.28□□□□□ -1.885e-6■□□□□ 9.1
PHF3-202ENST00000393387 STAP1Q9ULZ2 295 aa3.28□□□□□ -1.88
PHF3-202ENST00000393387 FARP1Q9Y4F1 1045 aaPredicted RBP3.28□□□□□ -1.88
PHF3-202ENST00000393387 UMODL1Q5DID0 1318 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 A8MUA0 341 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 F8W036 122 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 KCNJ13O60928 360 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 VPS26AO75436 327 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 SULT1C4O75897 302 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 IGFBP1P08833 259 aaPredicted RBP3.28□□□□□ -1.89
PHF3-202ENST00000393387 CCNYL3P0C7X3 344 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 ERVK-10P10266 1014 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 H2AFXP16104 143 aaPredicted RBP3.28□□□□□ -1.89
PHF3-202ENST00000393387 MAPK1P28482 360 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 PTGER2P43116 358 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 CDK7P50613 346 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 CDK9P50750 372 aaKnown RBP3.28□□□□□ -1.89
PHF3-202ENST00000393387 BLOC1S1P78537 153 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 TNK2Q07912 1038 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 MAD2L1Q13257 205 aaPredicted RBP3.28□□□□□ -1.89
PHF3-202ENST00000393387 ACVR2BQ13705 512 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 HERC3Q15034 1050 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 TGFBIQ15582 683 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 IGSF11Q5DX21 431 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 IL27RAQ6UWB1 636 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 GK5Q6ZS86 529 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 CD302Q8IX05 232 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 RBM12BQ8IXT5 1001 aaKnown RBP3.28□□□□□ -1.89
PHF3-202ENST00000393387 ZNF527Q8NB42 609 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 ACTRT2Q8TDY3 377 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 LINGO1Q96FE5 620 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 NGLY1Q96IV0 654 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 PARK7Q99497 189 aaKnown RBP3.28□□□□□ -1.89
PHF3-202ENST00000393387 HEPHQ9BQS7 1158 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 SH2D3AQ9BRG2 576 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 TMEM121Q9BTD3 319 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 SPATA5L1Q9BVQ7 753 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 NPLQ9BXD5 320 aaPredicted RBP3.28□□□□□ -1.89
PHF3-202ENST00000393387 SEMA4AQ9H3S1 761 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 PCDHGA6Q9Y5G7 932 aa3.28□□□□□ -1.89
PHF3-202ENST00000393387 TRPV2Q9Y5S1 764 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms