RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ATP1A2P50993 1020 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 SCNN1BP51168 640 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 RHOAP61586 193 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 SEPT6Q14141 434 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 HNRNPA1L2Q32P51 320 aaKnown RBP13.64□□□□□ -0.23
PTN-202ENST00000393083 PCID2Q5JVF3 399 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 ANO7Q6IWH7 933 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 ADGRD1Q6QNK2 874 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 TAOK1Q7L7X3 1001 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 WDR5BQ86VZ2 330 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTN-202ENST00000393083 MDGA1Q8NFP4 955 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 FRS2Q8WU20 508 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 SLC44A1Q8WWI5 657 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 ERLEC1Q96DZ1 483 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 ARNT2Q9HBZ2 717 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 NOD2Q9HC29 1040 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 PRSS16Q9NQE7 514 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 ZSCAN32Q9NX65 697 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 MOCS1Q9NZB8 636 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 TCAF1Q9Y4C2 921 aa13.64□□□□□ -0.23
PTN-202ENST00000393083 CXorf51AA0A1B0GTR3 108 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 MAGEB16A2A368 324 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 LILRB5O75023 590 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 ALDH1A2O94788 518 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 ATXN1LP0C7T5 689 aaKnown RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 SRCP12931 536 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 CES1P23141 567 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 COPAP53621 1224 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 CDK18Q07002 472 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 STARD3Q14849 445 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 SLC1A5Q15758 541 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 SMAD1Q15797 465 aaKnown RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 ANKRD20A4Q4UJ75 823 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 SIRPB2Q5JXA9 342 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 C9orf64Q5T6V5 341 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 MARK2Q7KZI7 788 aaKnown RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 TMEM135Q86UB9 458 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 EXOC3L1Q86VI1 746 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 LONP2Q86WA8 852 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 LRRC6Q86X45 466 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 UNC5BQ8IZJ1 945 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 PTCD2Q8WV60 388 aaKnown RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 CDKL2Q92772 493 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 CERS2Q96G23 380 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 FCRL3Q96P31 734 aaPredicted RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 SELENOSQ9BQE4 189 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 KIFC1Q9BW19 673 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 MKRN2Q9H000 416 aaKnown RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 IRF2BPLQ9H1B7 796 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 MRM3Q9HC36 420 aaKnown RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 PPANQ9NQ55 473 aaKnown RBP13.63□□□□□ -0.23
PTN-202ENST00000393083 CHRAC1Q9NRG0 131 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 SUN2Q9UH99 717 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 SLC25A13Q9UJS0 675 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 ADAM21Q9UKJ8 722 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 PCDHGA2Q9Y5H1 932 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 CKAP5Q14008 2032 aa13.63□□□□□ -0.23
PTN-202ENST00000393083 LOC285095A0A1B0GVY8 99 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 CCDC78A2IDD5 438 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 FOXO6A8MYZ6 492 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 K7ERQ8 282 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 AXIN1O15169 862 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 SYNCRIPO60506 623 aaKnown RBP13.62□□□□□ -0.23
PTN-202ENST00000393083 FGF1P05230 155 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 KRT15P19012 456 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 NDUFV2P19404 249 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 HLA-DPA1P20036 260 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 NMBRP28336 390 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 MGAT5Q09328 741 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 NAB1Q13506 487 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 FRG1Q14331 258 aaKnown RBP13.62□□□□□ -0.23
PTN-202ENST00000393083 GALNT3Q14435 633 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 CYS1Q717R9 158 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 SLC26A11Q86WA9 606 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 SRRM1Q8IYB3 904 aaKnown RBP13.62□□□□□ -0.23
PTN-202ENST00000393083 HMGB4Q8WW32 186 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 MFSD3Q96ES6 412 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 MRGPRX1Q96LB2 322 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 SLC6A17Q9H1V8 727 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 IL1RAPL1Q9NZN1 696 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 IQANK1A0A1B0GTG1 560 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 EDDM13A0A1B0GTR0 161 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 ZCWPW2A0A1B0GU75 182 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 SMAD6O43541 496 aaKnown RBP13.62□□□□□ -0.23
PTN-202ENST00000393083 UGT1A9O60656 530 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 SIN3BO75182 1162 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 ZNF821O75541 412 aaPredicted RBP13.62□□□□□ -0.23
PTN-202ENST00000393083 NDST3O95803 873 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 ADRA1DP25100 572 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 NNMTP40261 264 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 SLC20A2Q08357 652 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 DLG2Q15700 870 aa13.62□□□□□ -0.23
PTN-202ENST00000393083 ATXN7L2Q5T6C5 722 aaPredicted RBP13.62□□□□□ -0.23
PTN-202ENST00000393083 ZNF449Q6P9G9 518 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms