RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 LGALS13Q9UHV8 139 aa19.09■□□□□ 0.65
CCDC50-202ENST00000392456 GNPTGQ9UJJ9 305 aa19.09■□□□□ 0.65
CCDC50-202ENST00000392456 ADAMTS6Q9UKP5 1117 aa19.09■□□□□ 0.65
CCDC50-202ENST00000392456 PCDHGB4Q9UN71 923 aa19.09■□□□□ 0.65
CCDC50-202ENST00000392456 PCDHGB5Q9Y5G0 923 aa19.09■□□□□ 0.65
CCDC50-202ENST00000392456 KRBA1A5PL33 1030 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 ESRRBO95718 433 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 IGLV3-27P01718 113 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 FDFT1P37268 417 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 HSPA14Q0VDF9 509 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 CYP2A13Q16696 494 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 LPCAT2Q7L5N7 544 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 PPIL6Q8IXY8 311 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 ZNF683Q8IZ20 524 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 WBP2Q969T9 261 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 CCDC138Q96M89 665 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 CYP2S1Q96SQ9 504 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 OLFM1Q99784 485 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 PALMDQ9NP74 551 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 NPHS2Q9NP85 383 aa19.08■□□□□ 0.65
CCDC50-202ENST00000392456 CNTN5O94779 1100 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 NUMBP49757 651 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 CAMK1Q14012 370 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 TAF12Q16514 161 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 PLPP4Q5VZY2 271 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 RAP1GAP2Q684P5 730 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 LILRA6Q6PI73 481 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 ICA1LQ8NDH6 482 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 SPPL3Q8TCT6 385 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 POF1BQ8WVV4 589 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 KLHL5Q96PQ7 755 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 SLC22A12Q96S37 553 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.08■□□□□ 0.64
CCDC50-202ENST00000392456 SACM1LQ9NTJ5 587 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 OLA1Q9NTK5 396 aaKnown RBP19.08■□□□□ 0.64
CCDC50-202ENST00000392456 THAP1Q9NVV9 213 aa19.08■□□□□ 0.64
CCDC50-202ENST00000392456 UNC80Q8N2C7 3258 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 AP3B1O00203 1094 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 SIN3BO75182 1162 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 AVILO75366 819 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 GCATO75600 419 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 TM7SF2O76062 418 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 HOXC13P31276 330 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 IRS1P35568 1242 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 ATP5C1P36542 298 aaKnown RBP19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PDK1Q15118 436 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 RASA2Q15283 850 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 ALFQ53S48 1182 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 NADSYN1Q6IA69 706 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 CIR1Q86X95 450 aaPredicted RBP19.07■□□□□ 0.64
CCDC50-202ENST00000392456 CLVS1Q8IUQ0 354 aaPredicted RBP19.07■□□□□ 0.64
CCDC50-202ENST00000392456 ARHGAP12Q8IWW6 846 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 GALNT4Q8N4A0 578 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PHOSPHO2Q8TCD6 241 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 BRSK1Q8TDC3 778 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 DENND1AQ8TEH3 1009 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 IGSF8Q969P0 613 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PRR11Q96HE9 360 aaPredicted RBP19.07■□□□□ 0.64
CCDC50-202ENST00000392456 WDR83Q9BRX9 315 aaKnown RBP19.07■□□□□ 0.64
CCDC50-202ENST00000392456 A6NL46 340 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PEX1O43933 1283 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 HECTD3Q5T447 861 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 ITPRIPL1Q6GPH6 555 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 FBXL22Q6P050 247 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 TFAP2DQ7Z6R9 452 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PSMG2Q969U7 264 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 C1orf74Q96LT6 269 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 CDH19Q9H159 772 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 SAYSD1Q9NPB0 183 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 NINJ2Q9NZG7 142 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PAK5Q9P286 719 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 HEY2Q9UBP5 337 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 SLC7A8Q9UHI5 535 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PLA2G4CQ9UP65 541 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 SHOC2Q9UQ13 582 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 PCDHGA8Q9Y5G5 932 aa19.07■□□□□ 0.64
CCDC50-202ENST00000392456 CENPBD1B2RD01 187 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 RNF103O00237 685 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 SCAMP3O14828 347 aaKnown RBP19.06■□□□□ 0.64
CCDC50-202ENST00000392456 RGS13O14921 159 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 INHBBP09529 407 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 IFNA8P32881 189 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 SPARCL1Q14515 664 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 KCNJ11Q14654 390 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 CCDC58Q4VC31 144 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 ULK2Q8IYT8 1036 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.06■□□□□ 0.64
CCDC50-202ENST00000392456 LILRB1Q8NHL6 650 aaPredicted RBP19.06■□□□□ 0.64
CCDC50-202ENST00000392456 BTN2A3PQ96KV6 586 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 PSD2Q9BQI7 771 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 ENTPD7Q9NQZ7 604 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 TRPM5Q9NZQ8 1165 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 DNMT3LQ9UJW3 386 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 GRID1Q9ULK0 1009 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 C2orf71A6NGG8 1288 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 HACD1B0YJ81 288 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 HAT1O14929 419 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 KLKB1P03952 638 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 SLC2A3P11169 496 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 CES1P23141 567 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms