RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 NRDCO43847 1150 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 ZNF189O75820 626 aaPredicted RBP12.71□□□□□ -0.38
GGPS1-203ENST00000391855 DKK1O94907 266 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 TRBC1P01850 177 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 C1SP09871 688 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 KELP23276 732 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 DGKAP23743 735 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 PTPN7P35236 360 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 MARCKSL1P49006 195 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 RWDD2BP57060 319 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 ZBTB17Q13105 803 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 NFATC4Q14934 902 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 ACOX1Q15067 660 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 PRKD1Q15139 912 aaPredicted RBP12.71□□□□□ -0.38
GGPS1-203ENST00000391855 CNGA3Q16281 694 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 KAZNQ674X7 775 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 ESRP1Q6NXG1 681 aaKnown RBP12.71□□□□□ -0.38
GGPS1-203ENST00000391855 NPNTQ6UXI9 565 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 BBS12Q6ZW61 710 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 RAB44Q7Z6P3 723 aaPredicted RBP12.71□□□□□ -0.38
GGPS1-203ENST00000391855 EID2Q8N6I1 236 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 OR4C6Q8NH72 309 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 TFB1MQ8WVM0 346 aaKnown RBP12.71□□□□□ -0.38
GGPS1-203ENST00000391855 PIH1D2Q8WWB5 315 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 KRT35Q92764 455 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 COQ10AQ96MF6 247 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 VAT1Q99536 393 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 NLGN3Q9NZ94 848 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 SPASTQ9UBP0 616 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 AMFRQ9UKV5 643 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 NEUROG3Q9Y4Z2 214 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 CAPN8A6NHC0 703 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 APOC4-APOC2K7ER74 178 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 CACNB4O00305 520 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-203ENST00000391855 PDE2AO00408 941 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-203ENST00000391855 ARHGAP6O43182 974 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 SDC3O75056 442 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 APOC2P02655 101 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 PCCBP05166 539 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 HOXC4P09017 264 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-203ENST00000391855 TSHRP16473 764 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 TEAD1P28347 426 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 KIAA1024LP59773 190 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 ZNF211Q13398 564 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-203ENST00000391855 ILKQ13418 452 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 XRCC4Q13426 336 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 TEX44Q53QW1 395 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 RNF10Q8N5U6 811 aaKnown RBP12.7□□□□□ -0.38
GGPS1-203ENST00000391855 CNTD1Q8N815 330 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 NUS1Q96E22 293 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 DTD2Q96FN9 168 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 LYSMD1Q96S90 227 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 FERMT1Q9BQL6 677 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 DESI2Q9BSY9 194 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 APOOQ9BUR5 198 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 ADGRE3Q9BY15 652 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 SLC13A1Q9BZW2 595 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 SLC25A51Q9H1U9 297 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 PCDH9Q9HC56 1237 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 APOBEC3BQ9UH17 382 aaKnown RBP12.7□□□□□ -0.38
GGPS1-203ENST00000391855 WASF3Q9UPY6 502 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 DUSP10Q9Y6W6 482 aa12.7□□□□□ -0.38
GGPS1-203ENST00000391855 DNAH14Q0VDD8 3507 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 LRRK1Q38SD2 2015 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 MACROD2A1Z1Q3 448 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 GRID2IPA4D2P6 1211 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 NPIPB15A6NHN6 443 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-203ENST00000391855 SCAMP1O15126 338 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 KRT86O43790 486 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 RFPL3O75679 317 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 RASGRP1O95267 797 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 PYGLP06737 847 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 PDHA1P08559 390 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 ATXN1LP0C7T5 689 aaKnown RBP12.69□□□□□ -0.38
GGPS1-203ENST00000391855 PECAM1P16284 738 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-203ENST00000391855 JUNDP17535 347 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 CKMT2P17540 419 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 LHCGRP22888 699 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 CD86P42081 329 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 SKOR1P84550 965 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 SEMG2Q02383 582 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 PPARDQ03181 441 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 NIPAL4Q0D2K0 466 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 EIF2B5Q13144 721 aaKnown RBP12.69□□□□□ -0.38
GGPS1-203ENST00000391855 INPP5AQ14642 412 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 CCDC181Q5TID7 509 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 ZNF765Q7L2R6 523 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 PEX26Q7Z412 305 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 NT5DC3Q86UY8 548 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 PHACTR4Q8IZ21 702 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 SDR16C5Q8N3Y7 309 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 SLC25A45Q8N413 288 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 FSTL5Q8N475 847 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-203ENST00000391855 UBL4BQ8N7F7 174 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 ZNF548Q8NEK5 533 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-203ENST00000391855 IMP4Q96G21 291 aaKnown RBP12.69□□□□□ -0.38
GGPS1-203ENST00000391855 WDR92Q96MX6 357 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 QKIQ96PU8 341 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms