RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CDAP32320 146 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 STX2P32856 288 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ABCD1P33897 745 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 FASLGP48023 281 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 PPM1FP49593 454 aaPredicted RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 METAP2P50579 478 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 RPP30P78346 268 aaKnown RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 GALNT2Q10471 571 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 FOXD4Q12950 439 aaPredicted RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ARHGEF6Q15052 776 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 SF3B4Q15427 424 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 GPR68Q15743 365 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 CALCRLQ16602 461 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 C2orf68Q2NKX9 166 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ATP13A5Q4VNC0 1218 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 RRM2BQ7LG56 351 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 SMIM29Q86T20 159 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 GPAT4Q86UL3 456 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 LURAP1LQ8IV03 231 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 WDR63Q8IWG1 891 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 DHX40Q8IX18 779 aaKnown RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 SLC35F3Q8IY50 421 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 MUC20Q8N307 709 aaPredicted RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 NEK9Q8TD19 979 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 SORCS1Q8WY21 1168 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ERGIC1Q969X5 290 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 RNF125Q96EQ8 232 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 IGSF21Q96ID5 467 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 PPP1R13BQ96KQ4 1090 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 STRA6Q9BX79 667 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 HEMGNQ9BXL5 484 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 TTYH1Q9H313 450 aaPredicted RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 JMJD4Q9H9V9 463 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 MMP25Q9NPA2 562 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ASAH2Q9NR71 780 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 TMEM30AQ9NV96 361 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 CISD1Q9NZ45 108 aaKnown RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZNF224Q9NZL3 707 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 SLC9A2Q9UBY0 812 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZNF112Q9UJU3 913 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 TINAGQ9UJW2 476 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 SARDHQ9UL12 918 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 CDC14AQ9UNH5 594 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 ADAM18Q9Y3Q7 739 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 LSM4Q9Y4Z0 139 aaKnown RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 UTYO14607 1347 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 CGNL1Q0VF96 1302 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 TDRD15B5MCY1 1934 aaKnown RBP2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 RUSC2Q8N2Y8 1516 aa2.32□□□□□ -2.04
RNU6-541P-201ENST00000384709 CACNA1FO60840 1977 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 IGHV4OR15-8A0A075B7B6 117 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 SAA2-SAA4A0A096LPE2 208 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 PLSCR5A0PG75 271 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 PLEKHD1A6NEE1 506 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 TMEM202A6NGA9 273 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 PRAC2D3DTV9 90 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 BMPR1BO00238 502 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 SEC14L5O43304 696 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZIC3O60481 467 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 LDB3O75112 727 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 TMEM63AO94886 807 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 PYGLP06737 847 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 MCM3P25205 808 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 ABCD3P28288 659 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 HNRNPH2P55795 449 aaKnown RBP2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 SEC61BP60468 96 aaKnown RBP2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 TROAPQ12815 778 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 TNFAIP1Q13829 316 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 RUNX2Q13950 521 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 VEPH1Q14D04 833 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 GSTA3Q16772 222 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 IZUMO4Q1ZYL8 232 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 USP41Q3LFD5 358 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 SOWAHCQ53LP3 525 aaPredicted RBP2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 LRRC8EQ6NSJ5 796 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 CES5AQ6NT32 575 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 METTL2BQ6P1Q9 378 aaKnown RBP2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 Q6ZTC4 211 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 TUBA1AQ71U36 451 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 TAOK1Q7L7X3 1001 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 SATL1Q86VE3 508 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZBTB2Q8N680 514 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 CREB3L4Q8TEY5 395 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 ZC3HAV1LQ96H79 300 aaKnown RBP2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 METTL2AQ96IZ6 378 aaKnown RBP2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 KLHL15Q96M94 604 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 IL17FQ96PD4 163 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 SIN3AQ96ST3 1273 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 TUBA1CQ9BQE3 449 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 UBN1Q9NPG3 1134 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 ABI3Q9P2A4 366 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 SIX4Q9UIU6 781 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 NAALADL1Q9UQQ1 740 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 FAM96BQ9Y3D0 163 aa2.31□□□□□ -2.04
RNU6-541P-201ENST00000384709 A0A087WYN8 130 aa2.3□□□□□ -2.04
RNU6-541P-201ENST00000384709 TEX13CA0A0J9YWL9 993 aa2.3□□□□□ -2.04
RNU6-541P-201ENST00000384709 A0A1W2PRG0 241 aa2.3□□□□□ -2.04
RNU6-541P-201ENST00000384709 hDV102S1A0JD36 115 aa2.3□□□□□ -2.04
RNU6-541P-201ENST00000384709 LILRA5A6NI73 299 aa2.3□□□□□ -2.04
RNU6-541P-201ENST00000384709 IFITM10A6NMD0 228 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms