RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PCDHGB2Q9Y5G2 931 aa0.53□□□□□ -2.32
SNORD28-201ENST00000384706 PCNX3Q9H6A9 2034 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TRIOBPQ9H2D6 2365 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 IGLV3-10A0A075B6K4 115 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 DUXAA6NLW8 204 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 AQP12BA6NM10 295 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 C17orf100A8MU93 164 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 KLRF2D3W0D1 207 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TCERG1O14776 1098 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 WNT9BO14905 357 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CLIC2O15247 247 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 DCXO43602 365 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PRKNO60260 465 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 HBP1O60381 514 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PLA2G6O60733 806 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 WDR1O75083 606 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 NDUFB4O95168 129 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TNFRSF6BO95407 300 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ADAP00813 363 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 MYL3P08590 195 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CYP21A2P08686 494 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ERVK-10P10266 1014 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 G6PDP11413 515 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ACP5P13686 325 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SRD5A1P18405 259 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 S1PR1P21453 382 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CBLP22681 906 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 GPTP24298 496 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SHC1P29353 583 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SERPINA4P29622 427 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CORO1AP31146 461 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 HOXA13P31271 388 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CEACAM8P31997 349 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 DDIT3P35638 169 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 GJC1P36383 396 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 DCTP40126 519 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 EIF2S3P41091 472 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CCR10P46092 362 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 AMPHP49418 695 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CLCNKAP51800 687 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SEC61BP60468 96 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 EEF1A1P68104 462 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SAFBQ15424 915 aaKnown RBP eCLIP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RPE65Q16518 533 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 MPEG1Q2M385 716 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 EDRF1Q3B7T1 1238 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 MMEL1Q495T6 779 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TRIM60Q495X7 471 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 COBLL1Q53SF7 1204 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ESCO2Q56NI9 601 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PPP6R3Q5H9R7 873 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TCTEX1D4Q5JR98 221 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SH2D4BQ5SQS7 431 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 EEF1A1P5Q5VTE0 462 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 IZUMO3Q5VZ72 239 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 OR7E24Q6IFN5 339 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 NFRKBQ6P4R8 1299 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 IL20RBQ6UXL0 311 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RAD9BQ6WBX8 426 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RBMS3Q6XE24 437 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ASB18Q6ZVZ8 466 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RRAGAQ7L523 313 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PRSS45Q7RTY3 260 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 DPP9Q86TI2 863 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 HAPLN4Q86UW8 402 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CDC20BQ86Y33 519 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF584Q8IVC4 421 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 APLFQ8IW19 511 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CCDC117Q8IWD4 279 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CHERPQ8IWX8 916 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 C1orf87Q8N0U7 546 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 LINC00612Q8N6U2 182 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PTGR2Q8N8N7 351 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 BMPERQ8N8U9 685 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 FSIP1Q8NA03 581 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 LSM14AQ8ND56 463 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 GJC3Q8NFK1 279 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TTC8Q8TAM2 541 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SLC2A12Q8TD20 617 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 MAGEC3Q8TD91 643 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 GDPD5Q8WTR4 605 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 STYXQ8WUJ0 223 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 FCAMRQ8WWV6 532 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 THAP4Q8WY91 577 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 NCSTNQ92542 709 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 HSPH1Q92598 858 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RSC1A1Q92681 617 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TTC17Q96AE7 1141 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 C3orf49Q96BT1 292 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 LINGO1Q96FE5 620 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ZC3HAV1LQ96H79 300 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RIPOR3Q96MK2 946 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF570Q96NI8 536 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 AGAP3Q96P47 875 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PCYT2Q99447 389 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 MTERF1Q99551 399 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RTKNQ9BST9 563 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 SYT17Q9BSW7 474 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 MCRIP2Q9BUT9 160 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TRAF4Q9BUZ4 470 aaPredicted RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms