RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TCN1P20061 433 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MAGEA3P43357 314 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 EEFSECP57772 596 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ZDHHC20Q5W0Z9 365 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MRNIPQ6NTE8 343 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 BHLHB9Q6PI77 547 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PLET1Q6UQ28 207 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 DSG4Q86SJ6 1040 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PLCZ1Q86YW0 608 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 OR6P1Q8NGX9 317 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NDNFQ8TB73 568 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 C7orf43Q8WVR3 580 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CDC6Q99741 560 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FOLH1BQ9HBA9 442 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 AASSQ9UDR5 926 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NFIBO00712 420 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FAM155BO75949 473 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 S100A8P05109 93 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ACO1P21399 889 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CTNNB1P35222 781 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 RENBPP51606 427 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 IST1P53990 364 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FGL1Q08830 312 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ITPK1Q13572 414 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PDIA6Q15084 440 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 WDR72Q3MJ13 1102 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 USP39Q53GS9 565 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PHF13Q86YI8 300 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 RFKQ969G6 155 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MARVELD3Q96A59 401 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TMEM143Q96AN5 459 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 HMGXB4Q9UGU5 601 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 DMGDHQ9UI17 866 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 UBQLN1Q9UMX0 589 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NAP1L6A6NFF2 107 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ADM5C9JUS6 153 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PON1P27169 355 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 HPCAL1P37235 193 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GSTM5P46439 218 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SLC26A2P50443 739 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CXCR4P61073 352 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GALNT1Q10472 559 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CDC20Q12834 499 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 DOCK1Q14185 1865 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF549Q6P9A3 640 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 RGL4Q8IZJ4 473 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GMCL1P1Q8NEA9 526 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 BPIFB6Q8NFQ5 453 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 EPS8L3Q8TE67 593 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PHF10Q8WUB8 498 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PSD2Q9BQI7 771 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NUAK2Q9H093 628 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 KAT8Q9H7Z6 458 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CYP3A7-CYP3A51PA0A087WV96 503 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PER2O15055 1255 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CYP7B1O75881 506 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FYNP06241 537 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MTHFD1P11586 935 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CYP3A7P24462 503 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FAM102AQ5T9C2 384 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF746Q6NUN9 644 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 FAM180AQ6UWF9 173 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ZC3H3Q8IXZ2 948 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CAPNS2Q96L46 248 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CAMKK2Q96RR4 588 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 MIPEPQ99797 713 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CASS4Q9NQ75 786 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TMCC3Q9ULS5 477 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NCKAP1Q9Y2A7 1128 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PCDHGA4Q9Y5G9 962 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SPACA6W5XKT8 324 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ARID1BQ8NFD5 2236 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 RGS10O43665 173 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CCNKO75909 580 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 THRBP10828 461 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 RAB4AP20338 218 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 COMTP21964 271 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GSTM2P28161 218 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SULT1E1P49888 294 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 AKR1D1P51857 326 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 COX10Q12887 443 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 IDNKQ5T6J7 187 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ATF7IP2Q5U623 682 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PTAR1Q7Z6K3 402 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 EMC1Q8N766 993 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GPRASP2Q96D09 838 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 C17orf80Q9BSJ5 609 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TBC1D30Q9Y2I9 924 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ACOT9Q9Y305 439 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 PCDHB9Q9Y5E1 797 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 NRAPQ86VF7 1730 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 ESYT3A0FGR9 886 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SLC19A2O60779 497 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 SERPINA3P01011 423 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 YWHABP31946 246 aaKnown RBP4.89□□□□□ -1.63
PTPRD-203ENST00000381196 CASP4P49662 377 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 TAF6P49848 677 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GEMP55040 296 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 BACE1P56817 501 aa4.89□□□□□ -1.63
PTPRD-203ENST00000381196 GNA12Q03113 381 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms