RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 KLF10Q13118 480 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 SPOUT1Q5T280 376 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 TRIM67Q6ZTA4 783 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 CLSTN3Q9BQT9 956 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 PPP1R12CQ9BZL4 782 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 CYP4F11Q9HBI6 524 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 STX18Q9P2W9 335 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 CARNS1A5YM72 827 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 H3BNC9 293 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 INSIG1O15503 277 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 PENKP01210 267 aaPredicted RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 RPS24P62847 133 aaKnown RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 SLC34A1Q06495 639 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 GALNT1Q10472 559 aaPredicted RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 GALNT3Q14435 633 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 LSM12Q3MHD2 195 aaKnown RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 C1orf146Q5VVC0 180 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 ARHGAP22Q7Z5H3 698 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 HERC6Q8IVU3 1022 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 LSMEM2Q8N112 164 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 GALNT15Q8N3T1 639 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 TXNDC5Q8NBS9 432 aaKnown RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 OR4L1Q8NH43 312 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 TOX2Q96NM4 488 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 OR52B2Q96RD2 323 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 RTKNQ9BST9 563 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 OSBPL1AQ9BXW6 950 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 TANC1Q9C0D5 1861 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 SLC7A8Q9UHI5 535 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 ARL5AQ9Y689 179 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 GRID2O43424 1007 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 KRT36O76013 467 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 GOT2P00505 430 aaKnown RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 PMLP29590 882 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 VHLP40337 213 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 ABL2P42684 1182 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 ACTR3P61158 418 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 SLC25A3Q00325 362 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 CNKSR3Q6P9H4 555 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS16-202ENST00000380445 ACTRT2Q8TDY3 377 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 SGF29Q96ES7 293 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 TMEM169Q96HH4 297 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 NAF1Q96HR8 494 aaKnown RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 DNAJC1Q96KC8 554 aaKnown RBP12.65□□□□□ -0.38
VPS16-202ENST00000380445 TRIB3Q96RU7 358 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 NUF2Q9BZD4 464 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 SCUBE2Q9NQ36 999 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 CATSPERZQ9NTU4 200 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 SAGE1Q9NXZ1 904 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 ANGPTL2Q9UKU9 493 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 SSX2IPQ9Y2D8 614 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 TBC1D30Q9Y2I9 924 aa12.65□□□□□ -0.38
VPS16-202ENST00000380445 CHD5Q8TDI0 1954 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 RGSL1A5PLK6 1076 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 ZBTB14O43829 449 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 SEC24AO95486 1093 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 SCNN1BP51168 640 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 DSG1Q02413 1049 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 SLC39A5Q6ZMH5 540 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 PHTF2Q8N3S3 785 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CPSF7Q8N684 471 aaKnown RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 FAM81AQ8TBF8 368 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 RMDN1Q96DB5 314 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 PRICKLE1Q96MT3 831 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 TRMOQ9BU70 441 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 VN1R3Q9BXE9 311 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 INTS10Q9NVR2 710 aaKnown RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 YIPF1Q9Y548 306 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 KCTD3Q9Y597 815 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 SCN5AQ14524 2016 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 A0A088AWK7 358 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 EIF4E1BA6NMX2 242 aaKnown RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 C2orf81A6NN90 581 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 MEI4A8MW99 385 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 NEMP1O14524 444 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 KRT34O76011 436 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 LATS1O95835 1130 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 KLKB1P03952 638 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 EPHA3P29320 983 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 PPARGP37231 505 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 AP2B1P63010 937 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 CMPK2Q5EBM0 449 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 RIPOR1Q6ZS17 1223 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 KDM1BQ8NB78 822 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 PPFIBP2Q8ND30 876 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 RP9Q8TA86 221 aaKnown RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 ZFAND2BQ8WV99 257 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 ZNF558Q96NG5 402 aa12.64□□□□□ -0.39
VPS16-202ENST00000380445 KLF16Q9BXK1 252 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 UNKQ9C0B0 810 aaKnown RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 WDR55Q9H6Y2 383 aaPredicted RBP12.64□□□□□ -0.39
VPS16-202ENST00000380445 GKN1Q9NS71 199 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms