RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 NCF1CA8MVU1 366 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 KCNH1O95259 989 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 INHBBP09529 407 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 OR4Q2P0C623 313 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 NCF1P14598 390 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 JAK1P23458 1154 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 GLUD2P49448 558 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PGFP49763 221 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 RPS3AP61247 264 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PSME3P61289 254 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 CDH17Q12864 832 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 FAM83EQ2M2I3 478 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 FUT11Q495W5 492 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PRRT2Q7Z6L0 340 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ZDHHC17Q8IUH5 632 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ZNF419Q96HQ0 510 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 HSFY1Q96LI6 401 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 VPS45Q9NRW7 570 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 IPPQ9Y573 584 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 KCTD3Q9Y597 815 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 DNAJC25-GNG10A0A024R161 153 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 GJB3O75712 270 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 SNAI1O95863 264 aaPredicted RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 SMIM10L2AP0DMW4 78 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 SMIM10L2BP0DMW5 78 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 GLDCP23378 1020 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 GRIA3P42263 894 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 BRCC3P46736 316 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 C1QTNF8P60827 252 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ZBED5Q49AG3 693 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 TIGD2Q4W5G0 525 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ANKRD26P1Q6NSI1 321 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 CARM1Q86X55 608 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 NAT16Q8N8M0 369 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PNPLA3Q9NST1 481 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 RNF181Q9P0P0 153 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ERGIC3Q9Y282 383 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 LCTP09848 1927 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PFDN6O15212 129 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PRKAA1Q13131 559 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 DPYSQ14117 519 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 IKBKEQ14164 716 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 FASTKQ14296 549 aaKnown RBP12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 FAM187BQ17R55 369 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ARL13BQ3SXY8 428 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 FAM209AQ5JX71 171 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 IGFN1Q86VF2 1251 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 DDIASQ8IXT1 998 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 TTC39CQ8N584 583 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PCYOX1LQ8NBM8 494 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 APBB2Q92870 758 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ZNF560Q96MR9 790 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 TMEM209Q96SK2 561 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 BTRCQ9Y297 605 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 PCDHGA3Q9Y5H0 932 aa12.51□□□□□ -0.41
PRPF40B-202ENST00000380281 ANK1P16157 1881 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 PSMD11O00231 422 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 MPOP05164 745 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 MMP3P08254 477 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 CSE1LP55060 971 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 ECT2LQ008S8 904 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 NEDD8Q15843 81 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 INSCQ1MX18 579 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 PGS1Q32NB8 556 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 PLA2G4EQ3MJ16 856 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 DCAF4L1Q3SXM0 396 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 GPRC5AQ8NFJ5 357 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 SLC10A4Q96EP9 437 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 CYP2S1Q96SQ9 504 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 HBEGFQ99075 208 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 WDR6Q9NNW5 1121 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 PRSS51A0A1B0GVH4 220 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 TCAF2A6NFQ2 919 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 NR5A2O00482 541 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 B3GAT3O94766 335 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 SCNN1GP51170 649 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 SLC7A2P52569 658 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 RAB15P59190 212 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 YBX1P67809 324 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 TXNL4AP83876 142 aaKnown RBP12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 SNX17Q15036 470 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 ZYG11AQ6WRX3 759 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 RNF19BQ6ZMZ0 732 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 FAM35AQ86V20 835 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 C3orf58Q8NDZ4 430 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 CAPSLQ8WWF8 208 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 NT5MQ9NPB1 228 aa12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
PRPF40B-202ENST00000380281 ANKRD34BA5PLL1 514 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms