RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 WACQ9BTA9 647 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 BEX2Q9BXY8 128 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 AFF4Q9UHB7 1163 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 RUVBL2Q9Y230 463 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 XRCC1P18887 633 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 MAOBP27338 520 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ACTR2P61160 394 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FLI1Q01543 452 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 TARDBPQ13148 414 aaKnown RBP eCLIP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PEX6Q13608 980 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FAM214AQ32MH5 1076 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 TOR2AQ5JU69 321 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SWSAP1Q6NVH7 229 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ZFP90Q8TF47 636 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SSX3Q99909 188 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 GANQ9H2C0 597 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 C8orf33Q9H7E9 229 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 RPF1Q9H9Y2 349 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FNIP2Q9P278 1114 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FETUBQ9UGM5 382 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 DFFAO00273 331 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PSIP1O75475 530 aaKnown RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 UPK1BO75841 260 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 FDX1P10109 184 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 NR2C2P49116 596 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PSME3P61289 254 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 GPR68Q15743 365 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 SLFN11Q7Z7L1 901 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PACRGLQ8N7B6 248 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 CCNYQ8ND76 341 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 AGBL3Q8NEM8 1001 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 WDR36Q8NI36 951 aaKnown RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 DENND1AQ8TEH3 1009 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 LURAP1Q96LR2 239 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 MAGEB10Q96LZ2 347 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 POLR3FQ9H1D9 316 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PRMT8Q9NR22 394 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 VAPBO95292 243 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 SGPL1O95470 568 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 GPX6P59796 221 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 OSTNP61366 133 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 SCN1BQ07699 218 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PIGHQ14442 188 aaPredicted RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 RNASEH2BQ5TBB1 312 aaKnown RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 STRIP1Q5VSL9 837 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PIWIL3Q7Z3Z3 882 aaKnown RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 THNSL1Q8IYQ7 743 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 KRT78Q8N1N4 520 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PCDH20Q8N6Y1 951 aaKnown RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 DNAAF3Q8N9W5 541 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 OR10T2Q8NGX3 314 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 ZDHHC12Q96GR4 267 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 MECRQ9BV79 373 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 BIN3Q9NQY0 253 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 V9GYQ6 96 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 RSL1D1O76021 490 aaKnown RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 CDK1P06493 297 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 CYP11B1P15538 503 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 SAT1P21673 171 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 RPS3P23396 243 aaKnown RBP eCLIP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 DEFA5Q01523 94 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 MAB21L1Q13394 359 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 CDO1Q16878 200 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 THAP5Q7Z6K1 395 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 PGAM4Q8N0Y7 254 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 KIAA1958Q8N8K9 716 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 FNDC5Q8NAU1 212 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 INTS7Q9NVH2 962 aaKnown RBP11.8□□□□□ -0.52
NPHP4-202ENST00000378161 GTSE1Q9NYZ3 720 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 DPP7Q9UHL4 492 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 CYB5R1Q9UHQ9 305 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 HRH3Q9Y5N1 445 aa11.8□□□□□ -0.52
NPHP4-202ENST00000378161 SPATA31A5Q5VU36 1347 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SPATA31A7Q8IWB4 1347 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 METTL21EPA6NDL7 271 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 GLRA3O75311 464 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 CD48P09326 243 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 POU2F1P14859 743 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 MYL6P60660 151 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ROR1Q01973 937 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 RIPPLY1Q0D2K3 151 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 EMC2Q15006 297 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 GRTP1Q5TC63 336 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SHEQ5VZ18 495 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ZYG11AQ6WRX3 759 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 EIF3MQ7L2H7 374 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SLC5A11Q8WWX8 675 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 RANBP9Q96S59 729 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SEC22CQ9BRL7 303 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 TRIM8Q9BZR9 551 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 RNF146Q9NTX7 359 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 B3GNT2Q9NY97 397 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms