RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 LRRTM3Q86VH5 581 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 C3orf58Q8NDZ4 430 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 BRSK1Q8TDC3 778 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 CNDP1Q96KN2 507 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 TMLHEQ9NVH6 421 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 MRASO14807 208 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 KDM1AO60341 852 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ATP6V1G2O95670 118 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 SOD2P04179 222 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ACADMP11310 421 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 MOGSQ13724 837 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 GRAMD4Q6IC98 578 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 DPY19L2P1Q6NXN4 242 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 ADAMTSL2Q86TH1 951 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 PHACTR4Q8IZ21 702 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 FAM9CQ8IZT9 166 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 MARK4Q96L34 752 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 TBC1D10AQ9BXI6 508 aa14.55□□□□□ -0.08
TCOF1-202ENST00000377797 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 GABRDO14764 452 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 ATXN7L2Q5T6C5 722 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-202ENST00000377797 KIAA0930Q6ICG6 404 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-202ENST00000377797 IL27RAQ6UWB1 636 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 C11orf96Q7Z7L8 435 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 UBR7Q8N806 425 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 DCAKDQ8WVC6 231 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 SIGLEC10Q96LC7 697 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 THEGQ9P2T0 379 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 GNG14A0A1W2PPG7 69 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 SLC7A4O43246 635 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 PCNAP12004 261 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 SYN1P17600 705 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 MAPK1P28482 360 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 RAP1GDS1P52306 607 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 SLC10A2Q12908 348 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-202ENST00000377797 TCHHL1Q5QJ38 904 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-202ENST00000377797 FAM162AQ96A26 154 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 DPY30Q9C005 99 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 ADAM7Q9H2U9 754 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 COMMD8Q9NX08 183 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 NDUFAF1Q9Y375 327 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 ADAMTS4O75173 837 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 ECHS1P30084 290 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 AP1S1P61966 158 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 MSANTD2Q6P1R3 559 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 TRIM48Q8IWZ4 208 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 CHPFQ8IZ52 775 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 TK2O00142 265 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 PSMD12O00232 456 aaPredicted RBP14.54□□□□□ -0.08
TCOF1-202ENST00000377797 SEC22BO75396 215 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 PFKMP08237 780 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
TCOF1-202ENST00000377797 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
TCOF1-202ENST00000377797 FOXN2P32314 431 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 LRRC74AQ0VAA2 488 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 RTP2Q5QGT7 225 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 CDRT15Q96T59 188 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 ABCG8Q9H221 673 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 FNIP2Q9P278 1114 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 KLQ9UEF7 1012 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 CROTQ9UKG9 612 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 RWDD3Q9Y3V2 267 aa14.54□□□□□ -0.08
TCOF1-202ENST00000377797 PEX11AO75192 247 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 ZMPSTE24O75844 475 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 LBPP18428 481 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 MIER2Q8N344 545 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 SH3RF2Q8TEC5 729 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 SPATA17Q96L03 361 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CYP2S1Q96SQ9 504 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 C11orf84Q9BUA3 381 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-202ENST00000377797 SLC25A23Q9BV35 468 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 MGAT4DA6NG13 374 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 OAZ2O95190 189 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 GOT2P00505 430 aaKnown RBP14.53□□□□□ -0.08
TCOF1-202ENST00000377797 UBAP2LQ14157 1087 aaKnown RBP14.53□□□□□ -0.08
TCOF1-202ENST00000377797 PSRC1Q6PGN9 363 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-202ENST00000377797 IGDCC3Q8IVU1 814 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CXCL16Q9H2A7 254 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 TBC1D30Q9Y2I9 924 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 ILVBLA1L0T0 632 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 C1QTNF3-AMACRE9PGA6 284 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 IVDP26440 423 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 PIK3CGP48736 1102 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 GSCP56915 257 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-202ENST00000377797 KLC1Q07866 573 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CNSTQ6PJW8 725 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 SCIMPQ6UWF3 145 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 ARHGAP36Q6ZRI8 547 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CHST9Q7L1S5 443 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 COLGALT2Q8IYK4 626 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CDYL2Q8N8U2 506 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 COG4Q9H9E3 785 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 PNMA8BQ9ULN7 279 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-202ENST00000377797 GRIN2DO15399 1336 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 C5orf58C9J3I9 102 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 FGF18O76093 207 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 SLC25A3Q00325 362 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 ZNF460Q14592 562 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CYTH1Q15438 398 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms