RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 KLQ9UEF7 1012 aa12.45□□□□□ -0.42
DDR1-224ENST00000376567 PRKAG3Q9UGI9 489 aa12.45□□□□□ -0.42
DDR1-224ENST00000376567 SLC8A2Q9UPR5 921 aa12.45□□□□□ -0.42
DDR1-224ENST00000376567 LRCH1Q9Y2L9 728 aa12.45□□□□□ -0.42
DDR1-224ENST00000376567 KIAA1217Q5T5P2 1943 aa12.45□□□□□ -0.42
DDR1-224ENST00000376567 SSC5DA1L4H1 1573 aa12.45□□□□□ -0.42
DDR1-224ENST00000376567 SCN1AP35498 2009 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 TMEM88BA6NKF7 163 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 ENPP3O14638 875 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 TM7SF2O76062 418 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 GJB5O95377 273 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 FGF3P11487 239 aaPredicted RBP12.44□□□□□ -0.42
DDR1-224ENST00000376567 PSME3P61289 254 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 ELAVL2Q12926 359 aaKnown RBP12.44□□□□□ -0.42
DDR1-224ENST00000376567 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDR1-224ENST00000376567 TIGD2Q4W5G0 525 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 PIWIL4Q7Z3Z4 852 aaKnown RBP12.44□□□□□ -0.42
DDR1-224ENST00000376567 CEP97Q8IW35 865 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 CLDN19Q8N6F1 224 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 ZNF366Q8N895 744 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 LINGO1Q96FE5 620 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 TRIM54Q9BYV2 358 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 SMG9Q9H0W8 520 aaKnown RBP12.44□□□□□ -0.42
DDR1-224ENST00000376567 BATF3Q9NR55 127 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 CD84Q9UIB8 345 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 FAF1Q9UNN5 650 aaPredicted RBP12.44□□□□□ -0.42
DDR1-224ENST00000376567 PTGDR2Q9Y5Y4 395 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 DNAJA2O60884 412 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 ALPIP09923 528 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 RHOQP17081 205 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 UGT1A6P19224 532 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 UGT1A1P22309 533 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 UGT1A4P22310 534 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 UGT1A3P35503 534 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 UGT1A5P35504 534 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 SLC11A1P49279 550 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 GNA12Q03113 381 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 BCL2L1Q07817 233 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 GTF2H3Q13889 308 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 PTPRRQ15256 657 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 TBCELQ5QJ74 424 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 TSTD2Q5T7W7 516 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 PAOXQ6QHF9 649 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 ADCK2Q7Z695 626 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 SLC44A2Q8IWA5 706 aaPredicted RBP12.44□□□□□ -0.42
DDR1-224ENST00000376567 TMEM174Q8WUU8 243 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 NTAN1Q96AB6 310 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 SUSD3Q96L08 255 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 DRC3Q9H069 523 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 SLC25A51Q9H1U9 297 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 WDR70Q9NW82 654 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 RAI2Q9Y5P3 530 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 DOCK3Q8IZD9 2030 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.44□□□□□ -0.42
DDR1-224ENST00000376567 NIPSNAP2O75323 286 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 SELPP16109 830 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 ESRRGP62508 458 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 CYP4F8P98187 520 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 PGS1Q32NB8 556 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 MBLAC2Q68D91 279 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 ANKS3Q6ZW76 656 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 C11orf96Q7Z7L8 435 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 CPNE9Q8IYJ1 553 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 TRPV1Q8NER1 839 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 RNF217Q8TC41 542 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 CCDC126Q96EE4 140 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 FAXDC2Q96IV6 333 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 MAF1Q9H063 256 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 PKD2L2Q9NZM6 624 aa12.44□□□□□ -0.42
DDR1-224ENST00000376567 FKBP6O75344 327 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 IPO13O94829 963 aaKnown RBP12.43□□□□□ -0.42
DDR1-224ENST00000376567 ITGALP20701 1170 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 HALP42357 657 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 ARSDP51689 593 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 IL2P60568 153 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 PFKPQ01813 784 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 CCDC15Q0P6D6 951 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 GALNT2Q10471 571 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 AP5B1Q2VPB7 878 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 SYTL3Q4VX76 610 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 ATP6AP1LQ52LC2 224 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 MS4A13Q5J8X5 152 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 SETD3Q86TU7 594 aaPredicted RBP12.43□□□□□ -0.42
DDR1-224ENST00000376567 CAMK1DQ8IU85 385 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 ARNTL2Q8WYA1 636 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 ZNF570Q96NI8 536 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 KCNA7Q96RP8 456 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 CCT7Q99832 543 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 MOCS1Q9NZB8 636 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 MCM8Q9UJA3 840 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 NDUFAF1Q9Y375 327 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 PCDHB12Q9Y5F1 795 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 MAGEA13PA6NCF6 341 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 FKBP9O95302 570 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 TGDSO95455 350 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 FYNP06241 537 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 CLCN5P51795 746 aa12.43□□□□□ -0.42
DDR1-224ENST00000376567 HNRNPDQ14103 355 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms