RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ADI1Q9BV57 179 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 MINDY3Q9H8M7 445 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 SH3BP4Q9P0V3 963 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 TMCC3Q9ULS5 477 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 DOLKQ9UPQ8 538 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 TIMM22Q9Y584 194 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 CCL22O00626 93 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 MSI1O43347 362 aaKnown RBP16.84■□□□□ 0.29
VARS-215ENST00000375663 ASNA1O43681 348 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 PCLAFQ15004 111 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 FAM187BQ17R55 369 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 TJAP1Q5JTD0 557 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 IL23RQ5VWK5 629 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 CGB2Q6NT52 195 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 OR4L1Q8NH43 312 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 TRPM4Q8TD43 1214 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 CENPNQ96H22 339 aaPredicted RBP16.84■□□□□ 0.29
VARS-215ENST00000375663 HNRNPABQ99729 332 aaKnown RBP16.84■□□□□ 0.29
VARS-215ENST00000375663 NUP98P52948 1817 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 HNRNPCL2B2RXH8 293 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 TRIM24O15164 1050 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 RSBN1Q5VWQ0 802 aaPredicted RBP16.84■□□□□ 0.29
VARS-215ENST00000375663 OLFML1Q6UWY5 402 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 ZFP42Q96MM3 310 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 FAM126AQ9BYI3 521 aaPredicted RBP16.84■□□□□ 0.29
VARS-215ENST00000375663 REEP1Q9H902 201 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 AP3M1Q9Y2T2 418 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 SEC24AO95486 1093 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 RPS9P46781 194 aaKnown RBP16.84■□□□□ 0.29
VARS-215ENST00000375663 PWP1Q13610 501 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 PLEKHG4Q58EX7 1191 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 SPANXN2Q5MJ10 180 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 ARMC4Q5T2S8 1044 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 GLYATQ6IB77 296 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 STK40Q8N2I9 435 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 WDTC1Q8N5D0 677 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 PPTC7Q8NI37 304 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 PPP3R2Q96LZ3 170 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 SLC9A7Q96T83 725 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 REXO4Q9GZR2 422 aaKnown RBP16.84■□□□□ 0.29
VARS-215ENST00000375663 IPPQ9Y573 584 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 TRPV2Q9Y5S1 764 aa16.84■□□□□ 0.29
VARS-215ENST00000375663 ULK1O75385 1050 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 MBL2P11226 248 aaPredicted RBP16.83■□□□□ 0.29
VARS-215ENST00000375663 ZNF132P52740 706 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 GALNT3Q14435 633 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 TMEM63BQ5T3F8 832 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 SYTL1Q8IYJ3 562 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 GANCQ8TET4 914 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 EXOC2Q96KP1 924 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 SIX4Q9UIU6 781 aa16.83■□□□□ 0.29
VARS-215ENST00000375663 ALDH1A1P00352 501 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 LILRA4P59901 499 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 HIST2H2ACQ16777 129 aaPredicted RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 ARMCX4Q5H9R4 360 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 HIST2H2AA3Q6FI13 130 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 KLHDC10Q6PID8 442 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 DQX1Q8TE96 717 aaKnown RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 SELENOMQ8WWX9 145 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 UTP4Q969X6 686 aaKnown RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 MTFMTQ96DP5 389 aaKnown RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 GLT1D1Q96MS3 346 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 OSBPL6Q9BZF3 934 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 USP29Q9HBJ7 922 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 ZC4H2Q9NQZ6 224 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 C8orf4Q9NR00 106 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 MAGEL2Q9UJ55 1249 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 DUSP12Q9UNI6 340 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 LOC100506127A0A0U1RQW1 187 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 KLRG2A4D1S0 409 aaPredicted RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 YJEFN3A6XGL0 299 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 FGF1P05230 155 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 FGF3P11487 239 aaPredicted RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 CCNCP24863 283 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 RRM2P31350 389 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 ABL2P42684 1182 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 TTPAP49638 278 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 ZNF157P51786 506 aaPredicted RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 LIPEQ05469 1076 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 FBXO48Q5FWF7 155 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 PRAMEF19Q5SWL8 479 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 FAM171A1Q5VUB5 890 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 RALGPS2Q86X27 583 aaPredicted RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 TBATAQ96M53 351 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 PKP2Q99959 881 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 MLPHQ9BV36 600 aaPredicted RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 GMPPBQ9Y5P6 360 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 COPG1Q9Y678 874 aaKnown RBP16.83■□□□□ 0.28
VARS-215ENST00000375663 CNTNAP1P78357 1384 aa16.83■□□□□ 0.28
VARS-215ENST00000375663 PDZK1P1A8MUH7 402 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 MFN2O95140 757 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 IDH2P48735 452 aaKnown RBP16.82■□□□□ 0.28
VARS-215ENST00000375663 AFTPHQ6ULP2 937 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 EPGNQ6UW88 154 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 GPC2Q8N158 579 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 ZFYVE19Q96K21 471 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 ADAM2Q99965 735 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 SMPD4Q9NXE4 827 aa16.82■□□□□ 0.28
VARS-215ENST00000375663 SELENONQ9NZV5 590 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms