RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 NOL6Q9H6R4 1146 aaKnown RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 CAAP1Q9H8G2 361 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 KLF15Q9UIH9 416 aa12.28□□□□□ -0.44
LSM2-208ENST00000375661 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
LSM2-208ENST00000375661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.442e-12■■■□□ 18.5
LSM2-208ENST00000375661 LMO7DNF2Z398 122 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 H3BRJ5 948 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 FGF10O15520 208 aaPredicted RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 PSTPIP1O43586 416 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 ZMPSTE24O75844 475 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 TNFSF15O95150 251 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 CTNNA2P26232 953 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 MAPKAPK2P49137 400 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 YPEL5P62699 121 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 EIF2B5Q13144 721 aaKnown RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 SPIDRQ14159 915 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 KRT81Q14533 505 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 PDK2Q15119 407 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 PERM1Q5SV97 790 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 LINGO4Q6UY18 593 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 PARS2Q7L3T8 475 aaKnown RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 KCTD6Q8NC69 237 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 OR7D4Q8NG98 312 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 ISG20Q96AZ6 181 aaKnown RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 FAF2Q96CS3 445 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 KLC2Q9H0B6 622 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 CATSPERBQ9H7T0 1116 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 ETNK2Q9NVF9 386 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 TRMT1Q9NXH9 659 aaKnown RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 RCOR3Q9P2K3 495 aaPredicted RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 APOBEC3BQ9UH17 382 aaKnown RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 DNAI1Q9UI46 699 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 ACSL6Q9UKU0 697 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 MFHAS1Q9Y4C4 1052 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 PCDHGA7Q9Y5G6 932 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 HEMK1Q9Y5R4 338 aaPredicted RBP12.27□□□□□ -0.45
LSM2-208ENST00000375661 LRP4O75096 1905 aa12.27□□□□□ -0.45
LSM2-208ENST00000375661 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 IGLON5A6NGN9 336 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 NTN3O00634 580 aaPredicted RBP12.26□□□□□ -0.45
LSM2-208ENST00000375661 MUSKO15146 869 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 SPINT1O43278 529 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 DAPK3O43293 454 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 FTCDO95954 541 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 KRT1P04264 644 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 ANXA6P08133 673 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 SFTPCP11686 197 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 CTNNA1P35221 906 aaKnown RBP12.26□□□□□ -0.45
LSM2-208ENST00000375661 ACVRL1P37023 503 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 ETFBP38117 255 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 ARL4AP40617 200 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 PEX5P50542 639 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 CCNHP51946 323 aaPredicted RBP12.26□□□□□ -0.45
LSM2-208ENST00000375661 THOP1P52888 689 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 TAZQ16635 292 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 ESRP1Q6NXG1 681 aaKnown RBP12.26□□□□□ -0.45
LSM2-208ENST00000375661 MFSD7Q6UXD7 560 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 SLC35F3Q8IY50 421 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 KATNAL2Q8IYT4 538 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 PHACTR4Q8IZ21 702 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 SYCE1Q8N0S2 351 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 UMODL1-AS1Q8N2C9 162 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 SDR16C5Q8N3Y7 309 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 FSTL5Q8N475 847 aaPredicted RBP12.26□□□□□ -0.45
LSM2-208ENST00000375661 PQLC3Q8N755 202 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 PCDH19Q8TAB3 1148 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
LSM2-208ENST00000375661 CCDC3Q9BQI4 270 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 ZNF670Q9BS34 389 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 C1QTNF7Q9BXJ2 289 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 SLC13A1Q9BZW2 595 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 ATP13A1Q9HD20 1204 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 DDX56Q9NY93 547 aaKnown RBP12.26□□□□□ -0.45
LSM2-208ENST00000375661 AMFRQ9UKV5 643 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 PADI4Q9UM07 663 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 PCDHA3Q9Y5H8 950 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 LRRK1Q38SD2 2015 aa12.26□□□□□ -0.45
LSM2-208ENST00000375661 CYSRT1A8MQ03 144 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 NEMP1O14524 444 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 PLD2O14939 933 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 DDX3YO15523 660 aaKnown RBP12.25□□□□□ -0.45
LSM2-208ENST00000375661 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 GCATO75600 419 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 ITGB2P05107 769 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 BLKP51451 505 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 PDX1P52945 283 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 INHBCP55103 352 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 GEMIN4P57678 1058 aaKnown RBP12.25□□□□□ -0.45
LSM2-208ENST00000375661 ARF5P84085 180 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 GNA12Q03113 381 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 ZNF805Q5CZA5 627 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 PRRT3Q5FWE3 981 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 ZFYVE27Q5T4F4 411 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 AFMIDQ63HM1 303 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 FOXR1Q6PIV2 292 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 LVRNQ6Q4G3 990 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms